RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TNFRSF4P43489 277 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 TIAL1Q01085 375 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDKL5-202ENST00000379996 TBL3Q12788 808 aaKnown RBP7.69□□□□□ -1.18
CDKL5-202ENST00000379996 MPP3Q13368 585 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 CDH18Q13634 790 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 CEACAM7Q14002 265 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 CCDC6Q16204 474 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 ITPRIPL2Q3MIP1 535 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 PITRM1Q5JRX3 1037 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 ITPRIPL1Q6GPH6 555 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 LRRC69Q6ZNQ3 347 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 DEFB107AQ8IZN7 70 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 CFAP52Q8N1V2 620 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 HCAR2Q8TDS4 363 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 PDCD6IPQ8WUM4 868 aaKnown RBP7.69□□□□□ -1.18
CDKL5-202ENST00000379996 RILPQ96NA2 401 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 AGAP3Q96P47 875 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 BBS2Q9BXC9 721 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 YIPF3Q9GZM5 350 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 UBAP1Q9NZ09 502 aa7.69□□□□□ -1.18
CDKL5-202ENST00000379996 FAM86C2PA6NEL3 165 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 WASH3PC4AMC7 463 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 AP3B1O00203 1094 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TRIM24O15164 1050 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CIB2O75838 187 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 APOA4P06727 396 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PABPC4LP0CB38 370 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PABPC1P11940 636 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 OPRD1P41143 372 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CSKP41240 450 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ABCG1P45844 678 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 DAB2P98082 770 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PFKPQ01813 784 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 APOFQ13790 326 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 FUT11Q495W5 492 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 FSCBQ5H9T9 825 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 IRAK1BP1Q5VVH5 260 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RNF219Q5W0B1 726 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 LRRC8EQ6NSJ5 796 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KDELC1Q6UW63 502 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PID1Q7Z2X4 250 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RALGPS2Q86X27 583 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CIR1Q86X95 450 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 YAF2Q8IY57 180 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 WFDC5Q8TCV5 224 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KLHL32Q96NJ5 620 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ARNT2Q9HBZ2 717 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TCF20Q9UGU0 1960 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SDHDO14521 159 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 HDAC3O15379 428 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 NPHS1O60500 1241 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ZIC2O95409 532 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 MMP2P08253 660 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 HNRNPLP14866 589 aaKnown RBP eCLIP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 GRIA4P48058 902 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SERPINH1P50454 418 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 THOP1P52888 689 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 MS4A2Q01362 244 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ROR2Q01974 943 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ARL13AQ5H913 290 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 THEMIS2Q5TEJ8 643 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CASC4Q6P4E1 433 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PKN3Q6P5Z2 889 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RANBP10Q6VN20 620 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TFAP2DQ7Z6R9 452 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 FSTL5Q8N475 847 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CARNMT1Q8N4J0 409 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TXNDC5Q8NBS9 432 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ANAPC16Q96DE5 110 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 MRGPRX3Q96LB0 322 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 UHRF1Q96T88 793 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 APOL5Q9BWW9 433 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SPATA16Q9BXB7 569 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KLHL4Q9C0H6 718 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TCF7L2Q9NQB0 619 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 VPS45Q9NRW7 570 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SCOCQ9UIL1 159 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 INTS6Q9UL03 887 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 A0A0D9SEW6 157 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 E9PBE3 544 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 NEDD8-MDP1E9PL57 170 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TSPAN3O60637 253 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KLHL41O60662 606 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 C8BP07358 591 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SRFP11831 508 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ARSAP15289 507 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 ACVRL1P37023 503 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PPARGP37231 505 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RPL14P50914 215 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 INHBCP55103 352 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SATB1Q01826 763 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CDH17Q12864 832 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SMAD1Q15797 465 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CNPY1Q3B7I2 92 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 TECRLQ5HYJ1 363 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RETSATQ6NUM9 610 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms