RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 FLYWCH1Q4VC44 716 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PRSS48Q7RTY5 328 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RFX6Q8HWS3 928 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 DNAJC10Q8IXB1 793 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 SHC3Q92529 594 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PTP4A1Q93096 173 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CPB2Q96IY4 423 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 GATA5Q9BWX5 397 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ZC3H12CQ9C0D7 883 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 POPDC2Q9HBU9 364 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 XPNPEP3Q9NQH7 507 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CD300AQ9UGN4 299 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 LRFN2Q9ULH4 789 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 TBC1D24Q9ULP9 559 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PIPSLA2A3N6 862 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 HACD1B0YJ81 288 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC1A7O00341 560 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ACADMP11310 421 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PCMT1P22061 227 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RFC2P35250 354 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RPL7AP62424 266 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PRKCDQ05655 676 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 MAMLD1Q13495 774 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 DSG2Q14126 1118 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CTU2Q2VPK5 515 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 IQCCQ4KMZ1 466 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 HYIQ5T013 277 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 TTC23Q5W5X9 447 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CMC1Q7Z7K0 106 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ERO1BQ86YB8 467 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 MPP5Q8N3R9 675 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF680Q8NEM1 530 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 ENKURQ8TC29 256 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 SEMA4DQ92854 862 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RNF145Q96MT1 663 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 C1QTNF6Q9BXI9 259 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CEP41Q9BYV8 373 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RACGAP1Q9H0H5 632 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 DHX35Q9H5Z1 703 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 CD93Q9NPY3 652 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 KCNH7Q9NS40 1196 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 RBAKQ9NYW8 714 aaPredicted RBP8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 PLCL2Q9UPR0 1127 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
NHLRC3-201ENST00000379599 AQP12BA6NM10 295 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 EDIL3O43854 480 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 AIREO43918 545 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 C1QAP02745 245 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FABP1P07148 127 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NCK1P16333 377 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 CDKN2BP42772 138 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ATP5OP48047 213 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 IL5RAQ01344 420 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ORC1Q13415 861 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 CLCA4Q14CN2 919 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 GRIK4Q16099 956 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KLHL12Q53G59 568 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ARL13AQ5H913 290 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 STXBP5Q5T5C0 1151 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PIK3R6Q5UE93 754 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TIGD7Q6NT04 549 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ARHGAP36Q6ZRI8 547 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NLRP8Q86W28 1048 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 AQP12AQ8IXF9 295 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PLD5Q8N7P1 536 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 LPPQ93052 612 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 RBPMSQ93062 196 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TUBGCP3Q96CW5 907 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 YIPF6Q96EC8 236 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 DYNLL2Q96FJ2 89 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 DNAJC5Q9H3Z4 198 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 LRRC4Q9HBW1 653 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 SLAMF7Q9NQ25 335 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 INTS10Q9NVR2 710 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 RAP2CQ9Y3L5 183 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 OR6C65A6NJZ3 312 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TISP43B9A030 160 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 GNB5O14775 395 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 GRID2O43424 1007 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ECDO95905 644 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 LTFP02788 710 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PTX3P26022 381 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NUP62P37198 522 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 RFX2P48378 723 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 MEOX2P50222 304 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ARSFP54793 590 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 HSD17B7P56937 341 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KCNK10P57789 538 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 CABP4P57796 275 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TNK1Q13470 666 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FSCN1Q16658 493 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PTCHD3Q3KNS1 767 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms