RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 C1QTNF1Q9BXJ1 281 aa24.33■■□□□ 1.49
ECHDC3-201ENST00000379215 NMRAL1Q9HBL8 299 aa24.33■■□□□ 1.49
ECHDC3-201ENST00000379215 POLMQ9NP87 494 aaPredicted RBP24.33■■□□□ 1.49
ECHDC3-201ENST00000379215 TRMT6Q9UJA5 497 aaKnown RBP24.33■■□□□ 1.49
ECHDC3-201ENST00000379215 QSOX1O00391 747 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PLRG1O43660 514 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 TM7SF2O76062 418 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 LTA4HP09960 611 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 GM2AP17900 193 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 CD72P21854 359 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 STARD6P59095 220 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 IRF9Q00978 393 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 ZNF460Q14592 562 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 AGERQ15109 404 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 CRY1Q16526 586 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PDK4Q16654 411 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 CENPLQ8N0S6 344 aaPredicted RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 BTN2A2Q8WVV5 523 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 UBXN10Q96LJ8 280 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PANX3Q96QZ0 392 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PREBQ9HCU5 417 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PLXNA2O75051 1894 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 AP2A2O94973 939 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PCDH8O95206 1070 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 ZNF37AP17032 561 aaPredicted RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 CHRM3P20309 590 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 DGKEP52429 567 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 TAS2R38P59533 333 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 NEK5Q6P3R8 708 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 RGS9BPQ6ZS82 235 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 PHYKPLQ8IUZ5 450 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 NKAPQ8N5F7 415 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 SREK1Q8WXA9 508 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 GLYATL1Q969I3 302 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 MRGPRX1Q96LB2 322 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 TSSK1BQ9BXA7 367 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 KDM4CQ9H3R0 1056 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 TMEM216Q9P0N5 145 aa24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 RUVBL2Q9Y230 463 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-201ENST00000379215 MYO10Q9HD67 2058 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 CCDC189A1A4V9 331 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 PROCP04070 461 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 OR56A5P0C7T3 313 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 AKT1P31749 480 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 RPS21P63220 83 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 ZNF687Q8N1G0 1237 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 PLD6Q8N2A8 252 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 RAB3IL1Q8TBN0 382 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 LRRC8CQ8TDW0 803 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 KCTD4Q8WVF5 259 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 ZCCHC2Q9C0B9 1178 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 LTB4R2Q9NPC1 389 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 KLHL42Q9P2K6 505 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 SERGEFQ9UGK8 458 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 EMCNQ9ULC0 261 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 EYSQ5T1H1 3165 aa24.31■■□□□ 1.48
ECHDC3-201ENST00000379215 BPTFQ12830 3046 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 TCRBV21S2A2A0A5A6 115 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 KANSL1LA0AUZ9 987 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 TOP3BO95985 862 aaKnown RBP24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 RBP1P09455 135 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 CCDC166P0CW27 439 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 MSH3P20585 1137 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 ACAP2Q15057 778 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 SYT13Q7L8C5 426 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 PIM3Q86V86 326 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 GPR21Q99679 349 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 MRPL57Q9BQC6 102 aaKnown RBP24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 BOCQ9BWV1 1114 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 C1QTNF7Q9BXJ2 289 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 EPN3Q9H201 632 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 MED16Q9Y2X0 877 aa24.3■■□□□ 1.48
ECHDC3-201ENST00000379215 MAGEC1O60732 1142 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 NIPSNAP2O75323 286 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 NEFHP12036 1026 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 GPR1P46091 355 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 TIAL1Q01085 375 aaKnown RBP eCLIP24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 CSHL1Q14406 222 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 MAP7D1Q3KQU3 841 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 RAET1GQ6H3X3 334 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 LRRC8EQ6NSJ5 796 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 TMEM92Q6UXU6 159 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 OR14C36Q8NHC7 312 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 CHMP6Q96FZ7 201 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 SCYL1Q96KG9 808 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 MRPL46Q9H2W6 279 aaKnown RBP24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 C12orf65Q9H3J6 166 aaKnown RBP24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 LMAN1LQ9HAT1 526 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 IGSF5Q9NSI5 407 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 COQ6Q9Y2Z9 468 aa24.29■■□□□ 1.48
ECHDC3-201ENST00000379215 GMNCA6NCL1 334 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 FADS2P1A8MWK0 482 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 BPGMP07738 259 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 ATP1B2P14415 290 aaPredicted RBP24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 NDUFV2P19404 249 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 TARSP26639 723 aaKnown RBP24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 CA5AP35218 305 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 ADPRHP54922 357 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 ATP6V0D1P61421 351 aa24.28■■□□□ 1.48
ECHDC3-201ENST00000379215 TERF2Q15554 542 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms