RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 MARK2Q7KZI7 788 aaKnown RBP16.81■□□□□ 0.28
RER1-202ENST00000378512 PHYKPLQ8IUZ5 450 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 BRSK1Q8TDC3 778 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 BLOC1S5Q8TDH9 187 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 ATG4AQ8WYN0 398 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 BPIFA1Q9NP55 256 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 SMOXQ9NWM0 555 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 RNF215Q9Y6U7 377 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 KALRNO60229 2985 aa16.81■□□□□ 0.28
RER1-202ENST00000378512 A6NCN8 305 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 AGAP14A8MT82 685 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 VEGFDO43915 354 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 DXOO77932 396 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 SLC4A1P02730 911 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 SPAM1P38567 509 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ACTR1BP42025 376 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 FASLGP48023 281 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 PCBP4P57723 403 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 ACTR1AP61163 376 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 CXADRP78310 365 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 KHDC1Q4VXA5 237 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 DRICH1Q6PGQ1 229 aaPredicted RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 FOXR1Q6PIV2 292 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 IGF2-ASQ6U949 168 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 PCSK4Q6UW60 755 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 RBM44Q6ZP01 1051 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 SPRED1Q7Z699 444 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 B3GNT8Q7Z7M8 397 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ARL14Q8N4G2 192 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ZNF578Q96N58 590 aaPredicted RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 TBL1YQ9BQ87 522 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 LRIT1Q9P2V4 623 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ZNHIT2Q9UHR6 403 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 ARL5AQ9Y689 179 aa16.8■□□□□ 0.28
RER1-202ENST00000378512 GCN1Q92616 2671 aaKnown RBP16.8■□□□□ 0.28
RER1-202ENST00000378512 GRID2O43424 1007 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 C1QL1O75973 258 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ECEL1O95672 775 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 LPOP22079 712 aaPredicted RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 CCL7P80098 99 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 B4GALNT1Q00973 533 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ZNF547Q8IVP9 402 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ZNF248Q8NDW4 579 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 PATE1Q8WXA2 126 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 UBL7Q96S82 380 aaPredicted RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 OR2AG1Q9H205 316 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 LRRN3Q9H3W5 708 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 SUDS3Q9H7L9 328 aaPredicted RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 PKP3Q9Y446 797 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ATMQ13315 3056 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 GLYATL1P3A0A0U1RQE8 302 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 D6RAR5 112 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 AP2A1O95782 977 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 EML2O95834 649 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 PSMA3P25788 255 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 CA5AP35218 305 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 GPR3P46089 330 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 MAZP56270 477 aaKnown RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 SPIDRQ14159 915 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 CCNG2Q16589 344 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ZNF648Q5T619 568 aaPredicted RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 CHST15Q7LFX5 561 aaPredicted RBP16.79■□□□□ 0.28
RER1-202ENST00000378512 C11orf96Q7Z7L8 435 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 CCNJLQ8IV13 435 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 SFRP1Q8N474 314 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 DDHD1Q8NEL9 900 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 APOL2Q9BQE5 337 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 LRRC40Q9H9A6 602 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 ARFGAP3Q9NP61 516 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 PRKAB1Q9Y478 270 aa16.79■□□□□ 0.28
RER1-202ENST00000378512 C2orf81A6NN90 581 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 AGRPO00253 132 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 PPM1DO15297 605 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 STX7O15400 261 aaKnown RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 PSMD3O43242 534 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 B4GAT1O43505 415 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 LDB2O43679 373 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 BUD23O43709 281 aaKnown RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 ZNF140P52738 457 aaPredicted RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 XIAPP98170 497 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 PDE1BQ01064 536 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 TMEM115Q12893 351 aaPredicted RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 ITGA9Q13797 1035 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 PTPRCAPQ14761 206 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 CHRNA6Q15825 494 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 OR4K2Q8NGD2 314 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 C1orf54Q8WWF1 131 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 LIN37Q96GY3 246 aaPredicted RBP16.78■□□□□ 0.28
RER1-202ENST00000378512 SLC46A1Q96NT5 459 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 TIMM29Q9BSF4 260 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 FOXP3Q9BZS1 431 aa16.78■□□□□ 0.28
RER1-202ENST00000378512 KCNF1Q9H3M0 494 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms