RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NDUFS3O75489 264 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 BAIAP3O94812 1187 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 IL12AP29459 219 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 MRPL19P49406 292 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 SGSHP51688 502 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PLOD1Q02809 727 aaPredicted RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 FOXM1Q08050 763 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 GPR17Q13304 367 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 IFNEQ86WN2 208 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PTRH1Q86Y79 214 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 CAMK1DQ8IU85 385 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PACRGLQ8N7B6 248 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 GOLM1Q8NBJ4 401 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 SIDT2Q8NBJ9 832 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 TRPV3Q8NET8 790 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TSPEARQ8WU66 669 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 EEF1AKMT1Q8WVE0 214 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 SPATA17Q96L03 361 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TMEM74Q96NL1 305 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 HAUS8Q9BT25 410 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TDRD1Q9BXT4 1180 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 TRIM54Q9BYV2 358 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 BRINP2Q9C0B6 783 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ALG2Q9H553 416 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PCDHGC4Q9Y5F7 938 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PLXNA4Q9HCM2 1894 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 OR6C75A6NL08 312 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 E2F3O00716 465 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ACSL4O60488 711 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TRMUO75648 421 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 F11P03951 625 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 CDK4P11802 303 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 NCK1P16333 377 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ATF6P18850 670 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PSMA4P25789 261 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 CST5P28325 142 aaPredicted RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 SOX11P35716 441 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 PRKCZQ05513 592 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 NFYCQ13952 458 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 INPP5AQ14642 412 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ATP6AP1Q15904 470 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 ARHGAP22Q7Z5H3 698 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 SPATA19Q7Z5L4 167 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 CD200R1Q8TD46 325 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 CENPNQ96H22 339 aaPredicted RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 FAM193BQ96PV7 902 aaPredicted RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 HGH1Q9BTY7 390 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 C1orf50Q9BV19 199 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.67
BEST1-201ENST00000378043 CCDC68Q9H2F9 335 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 LIN28AQ9H9Z2 209 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 CLK4Q9HAZ1 481 aaKnown RBP10.84□□□□□ -0.67
BEST1-201ENST00000378043 MARCH5Q9NX47 278 aa10.84□□□□□ -0.67
BEST1-201ENST00000378043 KLHL33A6NCF5 533 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 TRIM64CA6NLI5 447 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SYCE1LA8MT33 242 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 GPR39O43194 453 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 KDELR3O43731 214 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 EEDO75530 441 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 CRCPO75575 148 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 KLKB1P03952 638 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 UROSP10746 265 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 IL10P22301 178 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 FASP25445 335 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 GATMP50440 423 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 TUBA4AP68366 448 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 LIPEQ05469 1076 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 GRIK2Q13002 908 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 RTP2Q5QGT7 225 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 Q6ZSR9 355 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SPRED1Q7Z699 444 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 OR52B6Q8NGF0 335 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 HM13Q8TCT9 377 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 PROKR1Q8TCW9 393 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 ADI1Q9BV57 179 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 CINPQ9BW66 212 aaPredicted RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 NUSAP1Q9BXS6 441 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 TRIM15Q9C019 465 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 INTS7Q9NVH2 962 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 ATXN10Q9UBB4 475 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 UBA2Q9UBT2 640 aaPredicted RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 FKBPLQ9UIM3 349 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SLC8A2Q9UPR5 921 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 TET1Q8NFU7 2136 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 TRIM64A6NGJ6 449 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 INPP4BO15327 924 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SLC22A3O75751 556 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 GJB5O95377 273 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 CLIC3O95833 236 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 C1RP00736 705 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 PKMP14618 531 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 MYF6P23409 242 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 KCNK10P57789 538 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 MERTKQ12866 999 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms