RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CDK14O94921 469 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 SEC31AO94979 1220 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GIMD1P0DJR0 217 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 C1orf61Q13536 156 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 AFTPHQ6ULP2 937 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 NXPE1Q8N323 547 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 DEFB124Q8NES8 71 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF514Q96K75 400 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 FTSJ1Q9UET6 329 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZNHIT2Q9UHR6 403 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GPSM3Q9Y4H4 160 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 FAM237BA0A1B0GVD1 139 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 CCDC162PA2VCL2 907 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 CCL22O00626 93 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 AVILO75366 819 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 RALBP11234 206 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 MSH3P20585 1137 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ARSDP51689 593 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 PRAMEP78395 509 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 CRADDP78560 199 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 TRIP6Q15654 476 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZRANB3Q5FWF4 1079 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 LYPLAL1Q5VWZ2 237 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 TAF8Q7Z7C8 310 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 LRRTM4Q86VH4 590 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GLMNQ92990 594 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 HDAC10Q969S8 669 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF778Q96MU6 729 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 TTC1Q99614 292 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 SUDS3Q9H7L9 328 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 WHRNQ9P202 907 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 SLC2A6Q9UGQ3 507 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
CKAP2-202ENST00000378034 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-202ENST00000378034 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CFAP99D6REC4 459 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 TRIM38O00635 465 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 KMOO15229 486 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 FFAR2O15552 330 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 TNFSF14O43557 240 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 KCNJ13O60928 360 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 KCNK5O95279 499 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 ACRV1P26436 265 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 NOVA1P51513 510 aaKnown RBP13.08□□□□□ -0.32
CKAP2-202ENST00000378034 ITGA8P53708 1063 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CTBSQ01459 385 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 KHDC1Q4VXA5 237 aaKnown RBP13.08□□□□□ -0.32
CKAP2-202ENST00000378034 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 ZNF648Q5T619 568 aaPredicted RBP13.08□□□□□ -0.32
CKAP2-202ENST00000378034 DUPD1Q68J44 220 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CASC4Q6P4E1 433 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CERS6Q6ZMG9 384 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 MMGT1Q8N4V1 131 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 OR4L1Q8NH43 312 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 DCUN1D1Q96GG9 259 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CNDP2Q96KP4 475 aaKnown RBP13.08□□□□□ -0.32
CKAP2-202ENST00000378034 SIGLEC10Q96LC7 697 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 COPS8Q99627 209 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 NAT9Q9BTE0 207 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 ZDHHC3Q9NYG2 299 aa13.08□□□□□ -0.32
CKAP2-202ENST00000378034 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 IGLV3-16A0A075B6K0 115 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 KLHL33A6NCF5 533 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 GPR39O43194 453 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 MTX2O75431 263 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 GOT2P00505 430 aaKnown RBP13.07□□□□□ -0.32
CKAP2-202ENST00000378034 PAMP19021 973 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 NMBRP28336 390 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 AKT1P31749 480 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 FOXN2P32314 431 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 CA5AP35218 305 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
CKAP2-202ENST00000378034 RPL21P46778 160 aaKnown RBP13.07□□□□□ -0.32
CKAP2-202ENST00000378034 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
CKAP2-202ENST00000378034 CLCNKAP51800 687 aa13.07□□□□□ -0.32
CKAP2-202ENST00000378034 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms