RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SRLQ86TD4 932 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 ECHDC2Q86YB7 292 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 DCP1BQ8IZD4 617 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 ADGRF3Q8IZF5 1079 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 PAQR4Q8N4S7 273 aaPredicted RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 MYCT1Q8N699 235 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 IQUBQ8NA54 791 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 TMEM161BQ8NDZ6 487 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 PHOSPHO2Q8TCD6 241 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 GDPD5Q8WTR4 605 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 MRPS27Q92552 414 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 TOP1MTQ969P6 601 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 MUL1Q969V5 352 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 DNAJC19Q96DA6 116 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 REXO5Q96IC2 774 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 PRPF18Q99633 342 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 WDR83Q9BRX9 315 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 TIPINQ9BVW5 301 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 NFKBIZQ9BYH8 718 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 FGFBP2Q9BYJ0 223 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 TRIM6Q9C030 488 aaPredicted RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 TNMDQ9H2S6 317 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 TTYH1Q9H313 450 aaPredicted RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 CUEDC2Q9H467 287 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 NXF3Q9H4D5 531 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 PDZD7Q9H5P4 517 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 SFXN1Q9H9B4 322 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 PARVGQ9HBI0 331 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 PANK4Q9NVE7 773 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 PRMT7Q9NVM4 692 aaPredicted RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 DACT1Q9NYF0 836 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 KCND2Q9NZV8 630 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 LARSQ9P2J5 1176 aaKnown RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 ICKQ9UPZ9 632 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 LAMP3Q9UQV4 416 aa4.66□□□□□ -1.66
PMS1-202ENST00000374826 NUP210Q8TEM1 1887 aaPredicted RBP4.66□□□□□ -1.66
PMS1-202ENST00000374826 C5orf42Q9H799 3197 aa4.65□□□□□ -1.66
PMS1-202ENST00000374826 A0A0U1RQF3 1178 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 LINC01553A4QN01 128 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 A6NNC1 897 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 K7ERI5 159 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 RHODO00212 210 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 ACKR2O00590 384 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 SLC28A2O43868 658 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 GCNT3O95395 438 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CHRNB1P11230 501 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 GAP43P17677 238 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
PMS1-202ENST00000374826 AXLP30530 894 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CTNNB1P35222 781 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 PBX3P40426 434 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 MLH1P40692 756 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 MATR3P43243 847 aaKnown RBP eCLIP4.65□□□□□ -1.67
PMS1-202ENST00000374826 ZNF131P52739 623 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 EFNA5P52803 228 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 TAS2R50P59544 299 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 OSTNP61366 133 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 SHC2P98077 582 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 TLE3Q04726 772 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 GAD2Q05329 585 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 BTKQ06187 659 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 POU5F1BQ06416 359 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CUL4BQ13620 913 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 PTGR1Q14914 329 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 KRTAP27-1Q3LI81 207 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 HERC4Q5GLZ8 1057 aaPredicted RBP4.65□□□□□ -1.67
PMS1-202ENST00000374826 SPOUT1Q5T280 376 aaKnown RBP4.65□□□□□ -1.67
PMS1-202ENST00000374826 ATF7IP2Q5U623 682 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 NUGGCQ68CJ6 796 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 SLC27A1Q6PCB7 646 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CCDC65Q8IXS2 484 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 SYTL1Q8IYJ3 562 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 NRSN1Q8IZ57 195 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 DEFB123Q8N688 67 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 ARNTL2Q8WYA1 636 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 BICD1Q96G01 975 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 GUCD1Q96NT3 240 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 FIZ1Q96SL8 496 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 RAD9AQ99638 391 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 ADPGKQ9BRR6 497 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 TRIM9Q9C026 710 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CDT1Q9H211 546 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 FZD8Q9H461 694 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 MRPL44Q9H9J2 332 aaKnown RBP4.65□□□□□ -1.67
PMS1-202ENST00000374826 C17orf75Q9HAS0 396 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 SLC28A3Q9HAS3 691 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 MAGEF1Q9HAY2 307 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 FZD3Q9NPG1 666 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CHST12Q9NRB3 414 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.65□□□□□ -1.67
PMS1-202ENST00000374826 TMEM161AQ9NX61 479 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 CACNG4Q9UBN1 327 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 RAB21Q9UL25 225 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 NFU1Q9UMS0 254 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 GDAQ9Y2T3 454 aa4.65□□□□□ -1.67
PMS1-202ENST00000374826 FAM237AA0A1B0GTK4 181 aa4.64□□□□□ -1.67
PMS1-202ENST00000374826 A0A1B0GUA9 196 aa4.64□□□□□ -1.67
PMS1-202ENST00000374826 FRMD3A2A2Y4 597 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms