RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PSME3P61289 254 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 DSG1Q02413 1049 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TUBB3Q13509 450 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 INSCQ1MX18 579 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TRMT5Q32P41 509 aaKnown RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 PARP15Q460N3 678 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 RABL3Q5HYI8 236 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TMEM25Q86YD3 366 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TWIST2Q8WVJ9 160 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 C19orf60Q96EN9 201 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 WRAP53Q9BUR4 548 aaKnown RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TREX1Q9NSU2 369 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 NSMCE4AQ9NXX6 385 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 WWOXQ9NZC7 414 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 TRIM43BA6NCK2 446 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 HIDE1A8MVS5 230 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 KPNA3O00505 521 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 SDHDO14521 159 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 SLC2A4P14672 509 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 HMOX2P30519 316 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 DPP6P42658 865 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CLCN5P51795 746 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 IMPG1Q17R60 797 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 FAM180BQ6P0A1 224 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 NCCRP1Q6ZVX7 275 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 FBXW8Q8N3Y1 598 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 TCF25Q9BQ70 676 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 FEM1AQ9BSK4 669 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ACAT2Q9BWD1 397 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 SOX17Q9H6I2 414 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CLIC5Q9NZA1 410 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 LSM7Q9UK45 103 aaKnown RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 TRIOBPQ9H2D6 2365 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 A0A0J9YYE9 177 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 A0A1B0GVM2 712 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 TCAF2A6NFQ2 919 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF487B1APH4 448 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 RECQLP46063 649 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 IL2P60568 153 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ARF5P84085 180 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 PLOD1Q02809 727 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CCNIQ14094 377 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 BNIPLQ7Z465 357 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 MYO1HQ8N1T3 1032 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF784Q8NCA9 323 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 PBXIP1Q96AQ6 731 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 SERPINI1Q99574 410 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 VPS45Q9NRW7 570 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 PCDHGB4Q9UN71 923 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 PCDHGB5Q9Y5G0 923 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CLDN11O75508 207 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 FGF1P05230 155 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 NFKBIAP25963 317 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CA5AP35218 305 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ACTR3P61158 418 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CLCQ05315 142 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ABRQ12979 859 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 NFYCQ13952 458 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 TECRLQ5HYJ1 363 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 MANEALQ5VSG8 457 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ANKS6Q68DC2 871 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 SERPINA9Q86WD7 417 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 RAB3IL1Q8TBN0 382 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 TDRD1Q9BXT4 1180 aaKnown RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 MRPL9Q9BYD2 267 aaKnown RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 ZFYVE1Q9HBF4 777 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 S100A14Q9HCY8 104 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 CXXC1Q9P0U4 656 aaPredicted RBP10.72□□□□□ -0.69
CXCL12-203ENST00000374429 DTNAQ9Y4J8 743 aa10.72□□□□□ -0.69
CXCL12-203ENST00000374429 LOC285556D6RIA3 1793 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 AZIN1O14977 448 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 CDK14O94921 469 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 S100BP04271 92 aaPredicted RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 APOA4P06727 396 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 HLA-EP13747 358 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 GSSP48637 474 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 PPM1FP49593 454 aaPredicted RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 CDC16Q13042 620 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 MED21Q13503 144 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 ZIK1Q3SY52 487 aaPredicted RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 LRTOMTQ8WZ04 291 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 LPGAT1Q92604 370 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 MED8Q96G25 268 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 SPATA17Q96L03 361 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 THUMPD3Q9BV44 507 aaKnown RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 FARSBQ9NSD9 589 aaKnown RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 PRKAG2Q9UGJ0 569 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 TMCO1Q9UM00 188 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 DNAJC15Q9Y5T4 150 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.69
CXCL12-203ENST00000374429 LAMA1P25391 3075 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 WASH3PC4AMC7 463 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF195O14628 629 aa10.71□□□□□ -0.69
CXCL12-203ENST00000374429 TGM5O43548 720 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms