RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SKIV2LQ15477 1246 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 ZSCAN26Q16670 478 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 FAM83EQ2M2I3 478 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 KHDC1Q4VXA5 237 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 GPRC6AQ5T6X5 926 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 AGAP9Q5VTM2 703 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 AGBL4Q5VU57 503 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 LYPLAL1Q5VWZ2 237 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 MACC1Q6ZN28 852 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 DSG4Q86SJ6 1040 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 HLA-CQ95604 372 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 DTD2Q96FN9 168 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 PPP1R16AQ96I34 528 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SCYL1Q96KG9 808 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 TSSK1BQ9BXA7 367 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 MKRN2Q9H000 416 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 CCDC68Q9H2F9 335 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 C8orf33Q9H7E9 229 aaPredicted RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 ZDHHC3Q9NYG2 299 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SERGEFQ9UGK8 458 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 COQ6Q9Y2Z9 468 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 FADS3Q9Y5Q0 445 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 NEMP2A6NFY4 417 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SOD1P00441 154 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 RALBP11234 206 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 TFEBP19484 476 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 NFKBIAP25963 317 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 OR4D1Q15615 310 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 CST6Q15828 149 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 GKAP1Q5VSY0 366 aaPredicted RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 TRIM42Q8IWZ5 723 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 TRAM1L1Q8N609 369 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 TXNDC5Q8NBS9 432 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 C7orf26Q96N11 449 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SORT1Q99523 831 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SPATA16Q9BXB7 569 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 CLPBQ9H078 707 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 ACSS2Q9NR19 701 aa15.54■□□□□ 0.08
NIPAL3-204ENST00000374399 SGTAO43765 313 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 VPS26AO75436 327 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 LYPLA1O75608 230 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 SERPINE1P05121 402 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 MYL2P10916 166 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 C6P13671 934 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 NTSR1P30989 418 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 RPS14P62263 151 aaKnown RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ELP6Q0PNE2 266 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 OVGP1Q12889 678 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 STX3Q13277 289 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ACOX1Q15067 660 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 LEXMQ3ZCV2 418 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ATG16L1Q676U5 607 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 C6orf89Q6UWU4 347 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 CYP2U1Q7Z449 544 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 SPATA21Q7Z572 469 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 CACUL1Q86Y37 369 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 RAVER1Q8IY67 606 aaKnown RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 NRSN1Q8IZ57 195 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 KCNV2Q8TDN2 545 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 FAM131CQ96AQ9 280 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ULK4Q96C45 1275 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 SGF29Q96ES7 293 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 THOC1Q96FV9 657 aaKnown RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 TSNARE1Q96NA8 513 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 GATA5Q9BWX5 397 aaPredicted RBP15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 DERL2Q9GZP9 239 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 ALG9Q9H6U8 611 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 DHRS7Q9Y394 339 aa15.53■□□□□ 0.08
NIPAL3-204ENST00000374399 WNT9AO14904 365 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 TRIM13O60858 407 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 MMP20O60882 483 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 RECQL5O94762 991 aaPredicted RBP15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 C7P10643 843 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 NEFHP12036 1026 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 MTHFD2P13995 350 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 CHRM3P20309 590 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 DRD1P21728 446 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 PPARGP37231 505 aaPredicted RBP15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 NSG1P42857 185 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 FAM46CQ5VWP2 391 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 CPNE9Q8IYJ1 553 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 OR2T3Q8NH03 318 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 FUBP1Q96AE4 644 aaKnown RBP15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 GRAMD1AQ96CP6 724 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 ATOH8Q96SQ7 321 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 COPS8Q99627 209 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 CDH19Q9H159 772 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 SLC6A17Q9H1V8 727 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 KCNK13Q9HB14 408 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 SYTL2Q9HCH5 934 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 RAD18Q9NS91 495 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 GNPTGQ9UJJ9 305 aa15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 CNOT6Q9ULM6 557 aaKnown RBP15.52■□□□□ 0.08
NIPAL3-204ENST00000374399 NUMA1Q14980 2115 aa15.52■□□□□ 0.07
NIPAL3-204ENST00000374399 TRPM6Q9BX84 2022 aa15.52■□□□□ 0.07
NIPAL3-204ENST00000374399 K7ESM1 405 aa15.51■□□□□ 0.07
NIPAL3-204ENST00000374399 KLF8O95600 359 aaPredicted RBP15.51■□□□□ 0.07
NIPAL3-204ENST00000374399 PYGLP06737 847 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms