RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MYO19Q96H55 970 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 MRGPRX3Q96LB0 322 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 C1orf21Q9H246 121 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 PNPOQ9NVS9 261 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 PLA2G4CQ9UP65 541 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 CACNA1IQ9P0X4 2223 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 MYLKQ15746 1914 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 GOLGA8TH3BQL2 631 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 CIB2O75838 187 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 TM7SF2O76062 418 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 VAPBO95292 243 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 CD160O95971 181 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 AHSGP02765 367 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 MMP2P08253 660 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGA1-203ENST00000374116 UQCRBP14927 111 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 ARNTP27540 789 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 GMPRP36959 345 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 ABCG1P45844 678 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 IDH3AP50213 366 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 PLK1P53350 603 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 IL10RBQ08334 325 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 SERINC3Q13530 473 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 USP10Q14694 798 aaKnown RBP14.2□□□□□ -0.14
HMGA1-203ENST00000374116 KIAA0930Q6ICG6 404 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-203ENST00000374116 KIAA1211LQ6NV74 962 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 SERPINA13PQ6UXR4 307 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 NUDT18Q6ZVK8 323 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 CACUL1Q86Y37 369 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 ACVR1CQ8NER5 493 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 MPP4Q96JB8 637 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 NELL2Q99435 816 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 C1QTNF1Q9BXJ1 281 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 MAGEH1Q9H213 219 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 VPS45Q9NRW7 570 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 OXSMQ9NWU1 459 aa14.2□□□□□ -0.14
HMGA1-203ENST00000374116 FCF1Q9Y324 198 aaKnown RBP14.2□□□□□ -0.14
HMGA1-203ENST00000374116 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF195O14628 629 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 HSPA4LO95757 839 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 F7P08709 466 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ARRB2P32121 409 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ETFBP38117 255 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 OXCT1P55809 520 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 WNT3AP56704 352 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 MARC1Q5VT66 337 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ESRP1Q6NXG1 681 aaKnown RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 TMEM92Q6UXU6 159 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ZYG11AQ6WRX3 759 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ARRDC2Q8TBH0 407 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 WFIKKN2Q8TEU8 576 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 CLDN23Q96B33 292 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 BTBD9Q96Q07 612 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 C2orf49Q9BVC5 232 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ACE2Q9BYF1 805 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 SLC6A17Q9H1V8 727 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 THAP10Q9P2Z0 257 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 ITGB1BP2Q9UKP3 347 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 SH3GLB1Q9Y371 365 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 STON1Q9Y6Q2 735 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 DMDP11532 3685 aa14.19□□□□□ -0.14
HMGA1-203ENST00000374116 MUC22E2RYF6 1773 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-203ENST00000374116 EPHX1P07099 455 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 ETS2P15036 469 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 COL9A1P20849 921 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 GABRB3P28472 473 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CD97P48960 835 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 PXNP49023 591 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 HK2P52789 917 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 MED21Q13503 144 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CYLC2Q14093 348 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 LRRC32Q14392 662 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 EIF4HQ15056 248 aaKnown RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 FBXO43Q4G163 708 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 BORAQ6PGQ7 559 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 ATG14Q6ZNE5 492 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 MAVSQ7Z434 540 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 PGBD5Q8N414 524 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 FBXL6Q8N531 539 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF557Q8N988 423 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 C2CD4AQ8NCU7 369 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 GABPB2Q8TAK5 448 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RANBP9Q96S59 729 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CDH19Q9H159 772 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 TNKS2Q9H2K2 1166 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 PDFQ9HBH1 243 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 ACOT9Q9Y305 439 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 TTC24A2A3L6 582 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 KDELR3O43731 214 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 PEX1O43933 1283 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 PRAMEF11O60813 436 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 SLC35E2BP0CK96 405 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 SMIM18P0DKX4 95 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms