RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SOX13Q9UN79 622 aa18.35■□□□□ 0.53
CDX4-201ENST00000373514 CCDC162PA2VCL2 907 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 H7C0S8 307 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 FOXD2O60548 495 aaPredicted RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 ASMTLO95671 621 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 CSF2P04141 144 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 HK3P52790 923 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 PMS2P54278 862 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 PPARDQ03181 441 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 ACVR1Q04771 509 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 NFATC2Q13469 925 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 C1orf61Q13536 156 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 UAP1Q16222 522 aaPredicted RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 PDPK2PQ6A1A2 396 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 CEP128Q6ZU80 1094 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 KANSL1Q7Z3B3 1105 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 OXR1Q8N573 874 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 ZNF548Q8NEK5 533 aaPredicted RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 GDAP1Q8TB36 358 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 ZNF398Q8TD17 642 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 UBLCP1Q8WVY7 318 aaPredicted RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 SIGLEC10Q96LC7 697 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 WDR83Q9BRX9 315 aaKnown RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 KIFC1Q9BW19 673 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 VIPAS39Q9H9C1 493 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 CARS2Q9HA77 564 aaKnown RBP18.34■□□□□ 0.53
CDX4-201ENST00000373514 TREX1Q9NSU2 369 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 ATXN10Q9UBB4 475 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 APPL1Q9UKG1 709 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 SLC17A4Q9Y2C5 497 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 PRKAB1Q9Y478 270 aa18.34■□□□□ 0.53
CDX4-201ENST00000373514 AP3B1O00203 1094 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 PIAS2O75928 621 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.53
CDX4-201ENST00000373514 KELP23276 732 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 PSMA3P25788 255 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 FOXN2P32314 431 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 GNPDA1P46926 289 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 ARL4CP56559 192 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 ITGA9Q13797 1035 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 HIF1AQ16665 826 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 BBS9Q3SYG4 887 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 ZRANB3Q5FWF4 1079 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 HP1BP3Q5SSJ5 553 aaPredicted RBP18.33■□□□□ 0.53
CDX4-201ENST00000373514 GPRC6AQ5T6X5 926 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 ADGRG6Q86SQ4 1221 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 SAP25Q8TEE9 199 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 HDAC10Q969S8 669 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 OR2AG1Q9H205 316 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 SMOXQ9NWM0 555 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 IL1RAPL1Q9NZN1 696 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 CRLS1Q9UJA2 301 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 BTBD3Q9Y2F9 522 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 MAD1L1Q9Y6D9 718 aa18.33■□□□□ 0.53
CDX4-201ENST00000373514 ARID1BQ8NFD5 2236 aaPredicted RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 COL5A1P20908 1838 aaPredicted RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 DNAJC6O75061 913 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 RASGRP1O95267 797 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 CD59P13987 128 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 ZNF8P17098 575 aaPredicted RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 ITGALP20701 1170 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 RXRGP48443 463 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 SKIDA1Q1XH10 827 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 PRRT3Q5FWE3 981 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 CENPUQ71F23 418 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 PIANPQ8IYJ0 282 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 DDHD1Q8NEL9 900 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 DTX3LQ8TDB6 740 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 ZNF669Q96BR6 464 aaPredicted RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 C19orf43Q9BQ61 176 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 CLPBQ9H078 707 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 CDC42EP4Q9H3Q1 356 aaKnown RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.52
CDX4-201ENST00000373514 SAYSD1Q9NPB0 183 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 SAMD15Q9P1V8 674 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 PLEKHM1Q9Y4G2 1056 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 SLC30A1Q9Y6M5 507 aa18.33■□□□□ 0.52
CDX4-201ENST00000373514 ARHGEF17Q96PE2 2063 aaPredicted RBP18.32■□□□□ 0.52
CDX4-201ENST00000373514 PTPRZ1P23471 2315 aaPredicted RBP18.32■□□□□ 0.52
CDX4-201ENST00000373514 SDR42E2A6NKP2 422 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 H3BM21 787 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 TNFRSF10CO14798 259 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 FFAR2O15552 330 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 ZNF883P0CG24 379 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 DGKAP23743 735 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 ARNTP27540 789 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 SEMA3AQ14563 771 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 AFTPHQ6ULP2 937 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 CRTC3Q6UUV7 619 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 TRMT10CQ7L0Y3 403 aaKnown RBP18.32■□□□□ 0.52
CDX4-201ENST00000373514 NLRP9Q7RTR0 991 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 SNX20Q7Z614 316 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 IGDCC3Q8IVU1 814 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 CCL4L1Q8NHW4 92 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 NETO1Q8TDF5 533 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 LMX1AQ8TE12 382 aa18.32■□□□□ 0.52
CDX4-201ENST00000373514 FCRL3Q96P31 734 aaPredicted RBP18.32■□□□□ 0.52
CDX4-201ENST00000373514 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms