RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ZSWIM9Q86XI8 627 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 CRLF3Q8IUI8 442 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 TBC1D3Q8IZP1 549 aaPredicted RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 VAT1Q99536 393 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 C10orf88Q9H8K7 445 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 GMEB2Q9UKD1 530 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.39■□□□□ 0.86
SYNC-201ENST00000373484 FADS3Q9Y5Q0 445 aa20.39■□□□□ 0.86
SYNC-201ENST00000373484 WDR87Q6ZQQ6 2873 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 BCLAF3A2AJT9 711 aaKnown RBP20.39■□□□□ 0.85
SYNC-201ENST00000373484 IGHV4-34P06331 123 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 TIMP2P16035 220 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 CRHR1P34998 444 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 SESN3P58005 492 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 TRAF2Q12933 501 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 TTC7BQ86TV6 843 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 IGDCC3Q8IVU1 814 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.39■□□□□ 0.85
SYNC-201ENST00000373484 BIRC7Q96CA5 298 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 KLF6Q99612 283 aaPredicted RBP20.39■□□□□ 0.85
SYNC-201ENST00000373484 PCDHGA5Q9Y5G8 931 aa20.39■□□□□ 0.85
SYNC-201ENST00000373484 KLHL33A6NCF5 533 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 MEI4A8MW99 385 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 TRIM49D1C9J1S8 452 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 AREL1O15033 823 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 SPINT1O43278 529 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 MMP2P08253 660 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 SERPINF2P08697 491 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 PIM1P11309 404 aaPredicted RBP20.38■□□□□ 0.85
SYNC-201ENST00000373484 ANPEPP15144 967 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 ITPKAP23677 461 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 CCR5P51681 352 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 SUOXP51687 545 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 PPP2CBP62714 309 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 PPP2CAP67775 309 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 DYNC1I2Q13409 638 aaKnown RBP20.38■□□□□ 0.85
SYNC-201ENST00000373484 UGP2Q16851 508 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 SYCP2LQ5T4T6 812 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 NEK5Q6P3R8 708 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 DARS2Q6PI48 645 aaKnown RBP20.38■□□□□ 0.85
SYNC-201ENST00000373484 CYP2U1Q7Z449 544 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 DNASE2BQ8WZ79 361 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 FERMT1Q9BQL6 677 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 VCX3BQ9H321 246 aa20.38■□□□□ 0.85
SYNC-201ENST00000373484 A0A1W2PQ67 120 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 EME2A4GXA9 379 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 UPK3BL1B0FP48 263 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 UPK3BL2E5RIL1 263 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ZNF189O75820 626 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 CREB5Q02930 508 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 BST1Q10588 318 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 LRRC73Q5JTD7 316 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 WDR45BQ5MNZ6 344 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 THEMIS2Q5TEJ8 643 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 PEAR1Q5VY43 1037 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 TRIM69Q86WT6 500 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ZNF567Q8N184 647 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 CCDC106Q9BWC9 280 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 SLC25A51Q9H1U9 297 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ARRDC1-AS1Q9H2J1 176 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 USP29Q9HBJ7 922 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 GLOD4Q9HC38 313 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 NDE1Q9NXR1 346 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 NCDNQ9UBB6 729 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 PILRBQ9UKJ0 227 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 RAI2Q9Y5P3 530 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ZFHX2Q9C0A1 2572 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 TP53BP1Q12888 1972 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 FAM237BA0A1B0GVD1 139 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 LATO43561 262 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 CD68P34810 354 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 PLA2G5P39877 138 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 CLCN2P51788 898 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 TMPRSS15P98073 1019 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ULK2Q8IYT8 1036 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 RBM15BQ8NDT2 890 aaKnown RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 ACMSDQ8TDX5 336 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 IMP4Q96G21 291 aaKnown RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 THAP1Q9NVV9 213 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 KLHL8Q9P2G9 620 aaPredicted RBP20.37■□□□□ 0.85
SYNC-201ENST00000373484 TRHDEQ9UKU6 1024 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 ITM2BQ9Y287 266 aa20.37■□□□□ 0.85
SYNC-201ENST00000373484 KCNN4O15554 427 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 TSPAN6O43657 245 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 FZD6O60353 706 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 RNGTTO60942 597 aaKnown RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 RFPL1O75677 317 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 PGLSO95336 258 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 XPAP23025 273 aaPredicted RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 MPLP40238 635 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 CD86P42081 329 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 DPP6P42658 865 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 POLR2LP62875 67 aaKnown RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 SYT12Q8IV01 421 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 RGL4Q8IZJ4 473 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 PDCD6IPQ8WUM4 868 aaKnown RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 SNX19Q92543 992 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 PIGKQ92643 395 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 FAM122AQ96E09 287 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 PRR11Q96HE9 360 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms