RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ELMO1Q92556 727 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 EZH1Q92800 747 aaPredicted RBP10.54□□□□□ -0.72
PGK1-201ENST00000373316 RNFT2Q96EX2 444 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 LRTM1Q9HBL6 345 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 ASAH2Q9NR71 780 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 FADS3Q9Y5Q0 445 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 TEX264Q9Y6I9 313 aa10.54□□□□□ -0.72
PGK1-201ENST00000373316 RFXANKO14593 260 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ACSL4O60488 711 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ACADVLP49748 655 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 HNMTP50135 292 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TUBA3CQ13748 450 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 USP39Q53GS9 565 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 DCAF12L1Q5VU92 463 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 DPY19L2P1Q6NXN4 242 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 PMF1Q6P1K2 205 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CHST9Q7L1S5 443 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TRMT11Q7Z4G4 463 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 RAB2BQ8WUD1 216 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 POLR1BQ9H9Y6 1135 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 BTBD3Q9Y2F9 522 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ELOVL7A1L3X0 281 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 MATN2O00339 956 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 MFN2O95140 757 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CLDN9O95484 217 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TCF3P15923 654 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 KELP23276 732 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CLDN10P78369 228 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 COX10Q12887 443 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 BTG3Q14201 252 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 CCDC85BQ15834 202 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 NEDD8Q15843 81 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ZNF554Q86TJ5 538 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 UTP15Q8TED0 518 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 ZUFSPQ96AP4 578 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 RANBP9Q96S59 729 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TIMM13Q9Y5L4 95 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 MYH10P35580 1976 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 PRUNE2Q8WUY3 3088 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TCRBV7S2A1N4TA0A589 114 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 KCNU1A8MYU2 1149 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 UPP2O95045 317 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 EPOP01588 193 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CAPGP40121 348 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CLCQ05315 142 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 SPIDRQ14159 915 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 NR1D2Q14995 579 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ZNHIT3Q15649 155 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 HACD2Q6Y1H2 254 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 WFIKKN2Q8TEU8 576 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 OR52E6Q96RD3 313 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 RAB11FIP5Q9BXF6 653 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 PDLIM7Q9NR12 457 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CACNG4Q9UBN1 327 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 GULP1Q9UBP9 304 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 CNOT11Q9UKZ1 510 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 SNX7Q9UNH6 387 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 LRRC42Q9Y546 428 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 GPR25O00155 361 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TLR5O60602 858 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 USP12O75317 370 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 THRBP10828 461 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 DDX6P26196 483 aaKnown RBP eCLIP10.53□□□□□ -0.72
PGK1-201ENST00000373316 EPHA3P29320 983 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 RPS9P46781 194 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 RGMBQ6NW40 437 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 OFCC1Q8IZS5 231 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 OR8H2Q8N162 312 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ADAM32Q8TC27 787 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 TFAP2BQ92481 460 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ZNF514Q96K75 400 aaPredicted RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 MOV10Q9HCE1 1003 aaKnown RBP10.53□□□□□ -0.72
PGK1-201ENST00000373316 DTLQ9NZJ0 730 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 DNAJB9Q9UBS3 223 aa10.53□□□□□ -0.72
PGK1-201ENST00000373316 ERN1O75460 977 aaKnown RBP10.52□□□□□ -0.72
PGK1-201ENST00000373316 CFHP08603 1231 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 RAP2AP10114 183 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 RPL38P63173 70 aaKnown RBP10.52□□□□□ -0.72
PGK1-201ENST00000373316 GBE1Q04446 702 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 ITGADQ13349 1161 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 SLC10A6Q3KNW5 377 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 CHSY3Q70JA7 882 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 KRT74Q7RTS7 529 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 GSTCDQ8NEC7 633 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 DDX1Q92499 740 aaKnown RBP10.52□□□□□ -0.72
PGK1-201ENST00000373316 EMID1Q96A84 441 aaPredicted RBP10.52□□□□□ -0.72
PGK1-201ENST00000373316 MED8Q96G25 268 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 GATA5Q9BWX5 397 aaPredicted RBP10.52□□□□□ -0.72
PGK1-201ENST00000373316 ATXN3LQ9H3M9 355 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 TRPC4Q9UBN4 977 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 MAN2B2Q9Y2E5 1009 aa10.52□□□□□ -0.72
PGK1-201ENST00000373316 LOC110117498-PIK3R3F6TDL0 507 aa10.52□□□□□ -0.73
PGK1-201ENST00000373316 SEC24AO95486 1093 aa10.52□□□□□ -0.73
PGK1-201ENST00000373316 MAGEA11P43364 429 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms