RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 UFM1P61960 85 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 RPS6KA2Q15349 733 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 USP41Q3LFD5 358 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 HABP4Q5JVS0 413 aaKnown RBP23.61■■□□□ 1.37
CDK9-201ENST00000373264 ACBD5Q5T8D3 534 aaPredicted RBP23.61■■□□□ 1.37
CDK9-201ENST00000373264 LYSMD3Q7Z3D4 306 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 MYO1HQ8N1T3 1032 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 CDYL2Q8N8U2 506 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 DNAJB14Q8TBM8 379 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
CDK9-201ENST00000373264 PRPF18Q99633 342 aaKnown RBP23.61■■□□□ 1.37
CDK9-201ENST00000373264 GPR45Q9Y5Y3 372 aa23.61■■□□□ 1.37
CDK9-201ENST00000373264 H0Y626 953 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 TPST1O60507 370 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 VPS26AO75436 327 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 ZFP36L2P47974 494 aaKnown RBP23.6■■□□□ 1.37
CDK9-201ENST00000373264 TUFMP49411 452 aaKnown RBP23.6■■□□□ 1.37
CDK9-201ENST00000373264 PAGE3Q5JUK9 113 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 IFNEQ86WN2 208 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 CAMK1DQ8IU85 385 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 PPWD1Q96BP3 646 aaKnown RBP23.6■■□□□ 1.37
CDK9-201ENST00000373264 PLD4Q96BZ4 506 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 BOCQ9BWV1 1114 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 CD274Q9NZQ7 290 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 ANAPC1Q9H1A4 1944 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 PLXNA4Q9HCM2 1894 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 TFAP2AP05549 437 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 SPATA31D3P0C874 917 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 SLC6A2P23975 617 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 CASP2P42575 452 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 ATP6V0D1P61421 351 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 FAM117BQ6P1L5 589 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 NCEH1Q6PIU2 408 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 SPATA31D4Q6ZUB0 917 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 TMEM150AQ86TG1 271 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 TMEM126BQ8IUX1 230 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 ASB2Q96Q27 587 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 CENPKQ9BS16 269 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 AURKCQ9UQB9 309 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 NDUFAF1Q9Y375 327 aa23.6■■□□□ 1.37
CDK9-201ENST00000373264 ARIH1Q9Y4X5 557 aaPredicted RBP23.6■■□□□ 1.37
CDK9-201ENST00000373264 PLOD2O00469 737 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 MTHFD1P11586 935 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 TRAP1Q12931 704 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 BFSP2Q13515 415 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 IKBKEQ14164 716 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 FUT11Q495W5 492 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 HACD2Q6Y1H2 254 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 PCYOX1LQ8NBM8 494 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 GRIN3AQ8TCU5 1115 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 ZFRQ96KR1 1074 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 TMEM175Q9BSA9 504 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 PIF1Q9H611 641 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 PLK2Q9NYY3 685 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 YIPF1Q9Y548 306 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 E2F3O00716 465 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 SMAD6O43541 496 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 OXTRP30559 389 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 SLC7A1P30825 629 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 ARL1P40616 181 aaPredicted RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 HTR6P50406 440 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 SMAD3P84022 425 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 TAF12Q16514 161 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 MAP7D1Q3KQU3 841 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 BLOC1S3Q6QNY0 202 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 GPSM1Q86YR5 675 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 LRRC43Q8N309 656 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 TMEM74Q96NL1 305 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 CDK5RAP1Q96SZ6 601 aaKnown RBP23.59■■□□□ 1.37
CDK9-201ENST00000373264 TCF12Q99081 682 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 RNF11Q9Y3C5 154 aa23.59■■□□□ 1.37
CDK9-201ENST00000373264 E5RI56 91 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 AP1G1O43747 822 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 MBL2P11226 248 aaPredicted RBP23.58■■□□□ 1.37
CDK9-201ENST00000373264 NCK1P16333 377 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 RPL10P27635 214 aaKnown RBP23.58■■□□□ 1.37
CDK9-201ENST00000373264 CSKP41240 450 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 IL2P60568 153 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 RHOAP61586 193 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 FAM151BQ6UXP7 276 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 GALNT15Q8N3T1 639 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 LKAAEAR1Q8TD35 194 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 ROPN1LQ96C74 230 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 LRRC58Q96CX6 371 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 FEM1AQ9BSK4 669 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 ADGRE3Q9BY15 652 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 MRPL9Q9BYD2 267 aaKnown RBP23.58■■□□□ 1.37
CDK9-201ENST00000373264 GRIP2Q9C0E4 1043 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 TLR9Q9NR96 1032 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 VPS51Q9UID3 782 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 TANC1Q9C0D5 1861 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 SOCS2O14508 198 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 EFEMP2O95967 443 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 CYBBP04839 570 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 PYGLP06737 847 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 IL12AP29459 219 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 TTPAP49638 278 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 ERVPABLB-1P60509 514 aa23.58■■□□□ 1.37
CDK9-201ENST00000373264 TGFBIQ15582 683 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms