RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 ALOXE3Q9BYJ1 711 aa18.19■□□□□ 0.5
MMP9-201ENST00000372330 MKRN2Q9H000 416 aaKnown RBP18.19■□□□□ 0.5
MMP9-201ENST00000372330 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
MMP9-201ENST00000372330 KCNH4Q9UQ05 1017 aa18.19■□□□□ 0.5
MMP9-201ENST00000372330 GRIP1Q9Y3R0 1128 aa18.19■□□□□ 0.5
MMP9-201ENST00000372330 PTGES3LE9PB15 166 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 F5H423 210 aaPredicted RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 NR5A2O00482 541 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 MTHFD1P11586 935 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 PSMB4P28070 264 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 GLUD2P49448 558 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 PIGFQ07326 219 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 UGP2Q16851 508 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 SLC10A6Q3KNW5 377 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 PLEKHG6Q3KR16 790 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 CUZD1Q86UP6 607 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 STK32CQ86UX6 486 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 RIMKLAQ8IXN7 391 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 HPDLQ96IR7 371 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CPB2Q96IY4 423 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 HEXIM2Q96MH2 286 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 RNF145Q96MT1 663 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 VPS35Q96QK1 796 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 OSBPL2Q9H1P3 480 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 MROH8Q9H579 483 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CCDC154A6NI56 674 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 ZBBXA8MT70 800 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CNTN5O94779 1100 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 EEFSECP57772 596 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 LSM3P62310 102 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 PRKCDQ05655 676 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 FADDQ13158 208 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 IL18R1Q13478 541 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 GALNT3Q14435 633 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 KIF19Q2TAC6 998 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CCNJQ5T5M9 372 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CCDC185Q8N715 623 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 TXNDC5Q8NBS9 432 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 PJA1Q8NG27 643 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 OR52K1Q8NGK4 314 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 TSPEARQ8WU66 669 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 BIRC7Q96CA5 298 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 ZHX1-C8orf76Q96EF9 292 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 ASB2Q96Q27 587 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 CYP2S1Q96SQ9 504 aa18.18■□□□□ 0.5
MMP9-201ENST00000372330 RPRD1BQ9NQG5 326 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 IARS2Q9NSE4 1012 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 INTS6Q9UL03 887 aaKnown RBP18.18■□□□□ 0.5
MMP9-201ENST00000372330 UPK1AO00322 258 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 SUPT7LO94864 414 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ARF4P18085 180 aaPredicted RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 SAT1P21673 171 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 RAB10P61026 200 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ISL1P61371 349 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 CTU2Q2VPK5 515 aaKnown RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 VPS26BQ4G0F5 336 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 YIF1BQ5BJH7 314 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ZNF598Q86UK7 904 aaKnown RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 TMBIM1Q969X1 311 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TMEM125Q96AQ2 219 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 CSPG4P5Q96PW8 444 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 SEPHS2Q99611 448 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 OMDQ99983 421 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TRMOQ9BU70 441 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 GON7Q9BXV9 100 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 CEP41Q9BYV8 373 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 MAGED2Q9UNF1 606 aaPredicted RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 SNX2O60749 519 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 MATN4O95460 622 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 LGALS2P05162 132 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TRAPPC2P0DI81 140 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TRAPPC2BP0DI82 140 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 RYKP34925 604 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 UGT2B10P36537 528 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ETV3P41162 512 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 GTF2A2P52657 109 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 NCS1P62166 190 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ARHGAP1Q07960 439 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TRAF3Q13114 568 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 TMEM132DQ14C87 1099 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 NCBP2-AS2Q69YL0 99 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 MIER2Q8N344 545 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 FAM109AQ8N4B1 249 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.17■□□□□ 0.5
MMP9-201ENST00000372330 LINC01465Q8N7H1 131 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 PSD4Q8NDX1 1056 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 UBA3Q8TBC4 463 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 P2RY11Q96G91 374 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 KAT8Q9H7Z6 458 aaKnown RBP18.17■□□□□ 0.5
MMP9-201ENST00000372330 ATP13A2Q9NQ11 1180 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ADPRHL2Q9NX46 363 aa18.17■□□□□ 0.5
MMP9-201ENST00000372330 ASB14A6NK59 587 aa18.16■□□□□ 0.5
MMP9-201ENST00000372330 CLDN24A6NM45 220 aa18.16■□□□□ 0.5
MMP9-201ENST00000372330 SHOXO15266 292 aa18.16■□□□□ 0.5
MMP9-201ENST00000372330 STMN1P16949 149 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms