RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GSAPA4D1B5 854 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SH3BGRLO75368 114 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 NAGLUP54802 743 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CDC42P60953 191 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ENPEPQ07075 957 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ACSM2AQ08AH3 577 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PTPRNQ16849 979 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 UBXN11Q5T124 520 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GPR107Q5VW38 600 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ACSM2BQ68CK6 577 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 UXS1Q8NBZ7 420 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 NDNQ99608 321 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ABCG4Q9H172 646 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 COL1A1P02452 1464 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ALOX15BO15296 676 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 HDAC3O15379 428 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PBX1P40424 430 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GSTM5P46439 218 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ATP12AP54707 1039 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CAP1Q01518 475 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SP2Q02086 613 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PFKFB4Q16877 469 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 RTKNQ9BST9 563 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 AGO3Q9H9G7 860 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PHPT1Q9NRX4 125 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 REXO2Q9Y3B8 237 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SNED1Q8TER0 1413 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SGTAO43765 313 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 NTSP30990 170 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 WNT3AP56704 352 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CWF19L1Q69YN2 538 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CRTC3Q6UUV7 619 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF621Q6ZSS3 439 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 RASGEF1CQ8N431 466 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 WDR12Q9GZL7 423 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC12A4Q9UP95 1085 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GMPPBQ9Y5P6 360 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SSX5O60225 188 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PLA2G4EQ3MJ16 856 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PMF1Q6P1K2 205 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 RBFAQ8N0V3 343 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PROX1Q92786 737 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 TIFAQ96CG3 184 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 COPS8Q99627 209 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF304Q9HCX3 659 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 CLDND1Q9NY35 253 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GABRQQ9UN88 632 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ASB3Q9Y575 518 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 A0A1W2PQ67 120 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 URADA6NGE7 173 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 STX11O75558 287 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ABCG1P45844 678 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 POP5Q969H6 163 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLITRK2Q9H156 845 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
RAPGEF1-201ENST00000372189 ISM1B1AKI9 464 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 DNM1LO00429 736 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 TPPPO94811 219 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 ETS2P15036 469 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 CYP4F8P98187 520 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 LRP6O75581 1613 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC26A3P40879 764 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZIK1Q3SY52 487 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 NETO2Q8NC67 525 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 FAM13CQ8NE31 585 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 S100A14Q9HCY8 104 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 GALNT8Q9NY28 637 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 ERVW-1Q9UQF0 538 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 A0A1B0GVM2 712 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 TCAF2A6NFQ2 919 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 H7C2Y5 167 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 MATN2O00339 956 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 GSC2O15499 205 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 UGT2B4P06133 528 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 LMO2P25791 158 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 GNA13Q14344 377 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
RAPGEF1-201ENST00000372189 LIPMQ5VYY2 423 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms