RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 MAGP20916 626 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CES1P23141 567 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 PSMB9P28065 219 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CD6P30203 668 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 RYKP34925 604 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 ARL1P40616 181 aaPredicted RBP16.07■□□□□ 0.16
CHD1L-203ENST00000369259 SLC26A2P50443 739 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CLCNKBP51801 687 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CDH13P55290 713 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 RACK1P63244 317 aaKnown RBP16.07■□□□□ 0.16
CHD1L-203ENST00000369259 EMX2Q04743 252 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CDK5R2Q13319 367 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 POU6F1Q14863 301 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 CLCA4Q14CN2 919 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 METTL4Q8N3J2 472 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 ZHX1-C8orf76Q96EF9 292 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 LRRC3Q9BY71 257 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 DDX28Q9NUL7 540 aaKnown RBP16.07■□□□□ 0.16
CHD1L-203ENST00000369259 EXD2Q9NVH0 621 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 COX16Q9P0S2 106 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 SLAMF8Q9P0V8 285 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 OPTCQ9UBM4 332 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 PNMA8BQ9ULN7 279 aaPredicted RBP16.07■□□□□ 0.16
CHD1L-203ENST00000369259 PCDHGA10Q9Y5H3 936 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 GPR45Q9Y5Y3 372 aa16.07■□□□□ 0.16
CHD1L-203ENST00000369259 AZIN1O14977 448 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 STAU1O95793 577 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 CASP2P42575 452 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 BCAT1P54687 386 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 MRPS15P82914 257 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 DGCR6Q14129 220 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 RCAN2Q14206 197 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 TMEM132DQ14C87 1099 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 NPTX1Q15818 432 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 ZNF404Q494X3 552 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 ZCCHC8Q6NZY4 707 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 GDPD3Q7L5L3 318 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 BPHLQ86WA6 291 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SIMC1Q8NDZ2 872 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 CNIH3Q8TBE1 160 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 TEKT5Q96M29 485 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 MIR1-1HGQ9H1L0 117 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 DNAJB9Q9UBS3 223 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 LEF1Q9UJU2 399 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SATB2Q9UPW6 733 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SSC5DA1L4H1 1573 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 PSMD3O43242 534 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 DIO3P55073 304 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 ZNF544Q6NX49 715 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SLC22A15Q8IZD6 547 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 CELF2-AS1Q8N7Q2 184 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SPERTQ8NA61 448 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 FBLIM1Q8WUP2 373 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 RPL3LQ92901 407 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 REXO5Q96IC2 774 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 DEPDC7Q96QD5 511 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 VAT1Q99536 393 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 LPIN3Q9BQK8 851 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 KAT8Q9H7Z6 458 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 INTS7Q9NVH2 962 aaKnown RBP16.06■□□□□ 0.16
CHD1L-203ENST00000369259 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 C3orf18Q9UK00 162 aa16.06■□□□□ 0.16
CHD1L-203ENST00000369259 A0A087WZ62 844 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 PDZK1P1A8MUH7 402 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 CCRL2O00421 344 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 CDK14O94921 469 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ANGPTL1O95841 491 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 C1RP00736 705 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ANXA6P08133 673 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 GTF2E2P29084 291 aaKnown RBP16.05■□□□□ 0.16
CHD1L-203ENST00000369259 TGFBR1P36897 503 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 FOXA1P55317 472 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 P2RX3P56373 397 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 HERVK_113P63132 956 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
CHD1L-203ENST00000369259 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
CHD1L-203ENST00000369259 FAM160B1Q5W0V3 765 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ANKRD34AQ69YU3 496 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 PNCKQ6P2M8 343 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 RALGPS2Q86X27 583 aaPredicted RBP16.05■□□□□ 0.16
CHD1L-203ENST00000369259 HS3ST5Q8IZT8 346 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 SVOPLQ8N434 492 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 TMEM199Q8N511 208 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 DTWD1Q8N5C7 304 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 PPHLN1Q8NEY8 458 aaKnown RBP16.05■□□□□ 0.16
CHD1L-203ENST00000369259 EGLN2Q96KS0 407 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 TEX37Q96LM6 180 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ASB2Q96Q27 587 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 ALG9Q9H6U8 611 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 MID1IP1Q9NPA3 183 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 POLG2Q9UHN1 485 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 GPSM3Q9Y4H4 160 aa16.05■□□□□ 0.16
CHD1L-203ENST00000369259 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms