RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 YIF1BQ5BJH7 314 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 VARS2Q5ST30 1063 aaKnown RBP17.81■□□□□ 0.44
CHTOP-201ENST00000368686 GLYATQ6IB77 296 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 SULT1C3Q6IMI6 304 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 SPATC1Q76KD6 591 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 SLC51BQ86UW2 128 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 VSIG10LQ86VR7 867 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 SLC22A15Q8IZD6 547 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 PARP16Q8N5Y8 322 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 C1orf127Q8N9H9 656 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 MKRN2Q9H000 416 aaKnown RBP17.81■□□□□ 0.44
CHTOP-201ENST00000368686 MIR1-1HGQ9H1L0 117 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 RPRD1BQ9NQG5 326 aaKnown RBP17.81■□□□□ 0.44
CHTOP-201ENST00000368686 FBXL12Q9NXK8 326 aa17.81■□□□□ 0.44
CHTOP-201ENST00000368686 PNMA8BQ9ULN7 279 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-201ENST00000368686 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 EEF2KO00418 725 aaKnown RBP17.8■□□□□ 0.44
CHTOP-201ENST00000368686 POLR1CO15160 346 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-201ENST00000368686 XPNPEP2O43895 674 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 TPH1P17752 444 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 CD6P30203 668 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 ATICP31939 592 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 S100A5P33763 92 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 PLK1P53350 603 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 KCNK10P57789 538 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 POU4F1Q01851 419 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 TPRG1LQ5T0D9 272 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 IDO2Q6ZQW0 420 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 ADAMTSL2Q86TH1 951 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 SYTL1Q8IYJ3 562 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 PSD4Q8NDX1 1056 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 ITFG1Q8TB96 612 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 C6orf62Q9GZU0 229 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-201ENST00000368686 DNAJB9Q9UBS3 223 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 MGAMO43451 1857 aa17.8■□□□□ 0.44
CHTOP-201ENST00000368686 PRKD3O94806 890 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 MED26O95402 600 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 JUNDP17535 347 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 APLP1P51693 650 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 INCA1Q0VD86 236 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 HSPA14Q0VDF9 509 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 CDH17Q12864 832 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 PAFAH1B3Q15102 231 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 DENND6AQ8IWF6 608 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 FAM109AQ8N4B1 249 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 PHF21BQ96EK2 531 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 GDF15Q99988 308 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 MLPHQ9BV36 600 aaPredicted RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 DUSP21Q9H596 190 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 TRIM39Q9HCM9 518 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 CHST12Q9NRB3 414 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 FZD10Q9ULW2 581 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 BOLA1Q9Y3E2 137 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 SLC16A6O15403 523 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 NOBOXO60393 691 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 EEDO75530 441 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 YES1P07947 543 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 ASNSP08243 561 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 LBPP18428 481 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 FSHRP23945 695 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 GGT5P36269 586 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 SLC35A2P78381 396 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 CTBP1Q13363 440 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 JADE1Q6IE81 842 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 PHYKPLQ8IUZ5 450 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 CADM2Q8N3J6 435 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 RPL3LQ92901 407 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 L3HYPDHQ96EM0 354 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 APOL2Q9BQE5 337 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 LRRC3Q9BY71 257 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 REXO4Q9GZR2 422 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 TDRD3Q9H7E2 651 aaKnown RBP17.79■□□□□ 0.44
CHTOP-201ENST00000368686 CDHR5Q9HBB8 845 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
CHTOP-201ENST00000368686 FADS2P1A8MWK0 482 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 PRMT5O14744 637 aaPredicted RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 KPNA6O60684 536 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 MRPS14O60783 128 aaKnown RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 ITGB3P05106 788 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 LTA4HP09960 611 aaKnown RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 TRAPPC2P0DI81 140 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 TRAPPC2BP0DI82 140 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 PCNAP12004 261 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 CD36P16671 472 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 POLR2CP19387 275 aaPredicted RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 CLK1P49759 484 aaKnown RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 ZNF135P52742 658 aaPredicted RBP17.78■□□□□ 0.44
CHTOP-201ENST00000368686 RCAN2Q14206 197 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 GALNT3Q14435 633 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 GRB7Q14451 532 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 CES5AQ6NT32 575 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 OTOP3Q7RTS5 596 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 AMER2Q8N7J2 671 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 SETD9Q8NE22 299 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 CNIH3Q8TBE1 160 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 RNF139Q8WU17 664 aa17.78■□□□□ 0.44
CHTOP-201ENST00000368686 TMEM74Q96NL1 305 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms