RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PAPOLAP51003 745 aaKnown RBP14.41□□□□□ -0.1
VAMP4-202ENST00000367740 STIM1Q13586 685 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 ZNF235Q14590 738 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 IRGCQ6NXR0 463 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 CERS6Q6ZMG9 384 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 BNC2Q6ZN30 1099 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-202ENST00000367740 SLFN11Q7Z7L1 901 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 FAM71AQ8IYT1 594 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 SIDT2Q8NBJ9 832 aaKnown RBP14.41□□□□□ -0.1
VAMP4-202ENST00000367740 SGSM3Q96HU1 749 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 ZNF514Q96K75 400 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-202ENST00000367740 SEMA5BQ9P283 1151 aa14.41□□□□□ -0.1
VAMP4-202ENST00000367740 ZNF624Q9P2J8 865 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-202ENST00000367740 NUP210LQ5VU65 1888 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 A0A1W2PQ67 120 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 FGF10O15520 208 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 PRICKLE3O43900 615 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SCRG1O75711 98 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 GNA14O95837 355 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ALPPP05187 535 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 XRCC1P18887 633 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 HTR1EP28566 365 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SLC19A1P41440 591 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 NOMO3P69849 1222 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 TAF3Q5VWG9 929 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SMYD5Q6GMV2 418 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 KLHL10Q6JEL2 608 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ZNF765Q7L2R6 523 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 BPHLQ86WA6 291 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 PHYKPLQ8IUZ5 450 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 MSANTD4Q8NCY6 345 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 EXD1Q8NHP7 514 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 GRHL3Q8TE85 626 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 CPA5Q8WXQ8 436 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SCRN2Q96FV2 425 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ZDHHC12Q96GR4 267 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 CCDC34Q96HJ3 373 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 NLNQ9BYT8 704 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SLC39A8Q9C0K1 460 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ZNF552Q9H707 407 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ZBTB20Q9HC78 741 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-202ENST00000367740 SIX2Q9NPC8 291 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 CHST11Q9NPF2 352 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 FGF21Q9NSA1 209 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 EPHA6Q9UF33 1036 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 CSAG2Q9Y5P2 127 aa14.4□□□□□ -0.1
VAMP4-202ENST00000367740 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 LSM8O95777 96 aaKnown RBP14.39□□□□□ -0.11
VAMP4-202ENST00000367740 VIPP01282 170 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 PYGLP06737 847 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 CAPN1P07384 714 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 CYP11B1P15538 503 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 PON1P27169 355 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 ACY1Q03154 408 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 TRAF2Q12933 501 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 MYBPC3Q14896 1274 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 ZNF630Q2M218 657 aaPredicted RBP14.39□□□□□ -0.11
VAMP4-202ENST00000367740 LRRC66Q68CR7 880 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 FAM198BQ6UWH4 519 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 TMEM126BQ8IUX1 230 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 TRIM48Q8IWZ4 208 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 NELFBQ8WX92 580 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 UBXN4Q92575 508 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 RELTQ969Z4 430 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 PSKH2Q96QS6 385 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 MLPHQ9BV36 600 aaPredicted RBP14.39□□□□□ -0.11
VAMP4-202ENST00000367740 RAB33BQ9H082 229 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 SP110Q9HB58 689 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 KIAA1468Q9P260 1216 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 DNAJC12Q9UKB3 198 aa14.39□□□□□ -0.11
VAMP4-202ENST00000367740 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
VAMP4-202ENST00000367740 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
VAMP4-202ENST00000367740 SPTBP11277 2137 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 JCHAINP01591 159 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 CTPS1P17812 591 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 CLCNKAP51800 687 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 GPR18Q14330 331 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 RFTN1Q14699 578 aaPredicted RBP14.38□□□□□ -0.11
VAMP4-202ENST00000367740 EXOC3L4Q17RC7 722 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 PLEKHS1Q5SXH7 462 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 NAA35Q5VZE5 725 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 GBP6Q6ZN66 633 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 USP45Q70EL2 814 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 NLRP8Q86W28 1048 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 ARHGAP12Q8IWW6 846 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 DSELQ8IZU8 1212 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 ZADH2Q8N4Q0 377 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 FAR1Q8WVX9 515 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 SMARCE1Q969G3 411 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 SNX21Q969T3 373 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 LRFN5Q96NI6 719 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 TRAPPC9Q96Q05 1148 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 SMIM14Q96QK8 99 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
VAMP4-202ENST00000367740 OSGEPL1Q9H4B0 414 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 RMI1Q9H9A7 625 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 CTNND2Q9UQB3 1225 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms