RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 BZW1Q7L1Q6 419 aaKnown RBP3.68□□□□□ -1.82
PTPRC-202ENST00000367364 ARHGAP22Q7Z5H3 698 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 ITPRIPQ8IWB1 547 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 ZNF440Q8IYI8 595 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 SMYD1Q8NB12 490 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 OTUD7AQ8TE49 926 aaPredicted RBP3.68□□□□□ -1.82
PTPRC-202ENST00000367364 SLC20A1Q8WUM9 679 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 RUBCNQ92622 972 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 P3H4Q92791 437 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 ZBTB10Q96DT7 871 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 DTNBP1Q96EV8 351 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 RBM41Q96IZ5 413 aaKnown RBP3.68□□□□□ -1.82
PTPRC-202ENST00000367364 TSGA10Q9BZW7 698 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 TRIM15Q9C019 465 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 TRIM7Q9C029 511 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 UBA5Q9GZZ9 404 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 HSD3B7Q9H2F3 369 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 KAT14Q9H8E8 782 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 SLC40A1Q9NP59 571 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 ATP8A2Q9NTI2 1148 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 FAM120CQ9NX05 1096 aaKnown RBP3.68□□□□□ -1.82
PTPRC-202ENST00000367364 SLC39A10Q9ULF5 831 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 HPCAL4Q9UM19 191 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 CDC14AQ9UNH5 594 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 USP16Q9Y5T5 823 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 CAPN7Q9Y6W3 813 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 TOPBP1Q92547 1522 aa3.68□□□□□ -1.82
PTPRC-202ENST00000367364 CLTCQ00610 1675 aaKnown RBP3.68□□□□□ -1.82
PTPRC-202ENST00000367364 PARP4Q9UKK3 1724 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 SBNO1A3KN83 1393 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 MYO5AQ9Y4I1 1855 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 A0A0J9YWU9 116 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 C5orf60A6NFR6 353 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 B4DLN1 442 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 PLRG1O43660 514 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 SLC25A17O43808 307 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ZNF821O75541 412 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 VIMP08670 466 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 GHRP10912 638 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 IDO1P14902 403 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 EZRP15311 586 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ZNF24P17028 368 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ITGA2P17301 1181 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 PEX19P40855 299 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 PSMC4P43686 418 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CCT5P48643 541 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 GNAQP50148 359 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 PAPOLAP51003 745 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ZBED6P86452 979 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 BTG3Q14201 252 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 SNCBQ16143 134 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 STX1AQ16623 288 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 GALNTL6Q49A17 601 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CCDC40Q4G0X9 1142 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CCDC38Q502W7 563 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 XKR6Q5GH73 641 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 SFMBT2Q5VUG0 894 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CYB5D1Q6P9G0 228 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 C15orf39Q6ZRI6 1047 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 C11orf57Q6ZUT1 292 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 EXOC8Q8IYI6 725 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 AMER3Q8N944 861 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 TMEM190Q8WZ59 177 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 NCSTNQ92542 709 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CCDC47Q96A33 483 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 AZIN2Q96A70 460 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 PPP1R14BQ96C90 147 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ZNF653Q96CK0 615 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 SPDL1Q96EA4 605 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ARPC5LQ9BPX5 153 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ALDH8A1Q9H2A2 487 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 TNMDQ9H2S6 317 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ERVMER34-1Q9H9K5 563 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 TRMT1Q9NXH9 659 aaKnown RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CDC23Q9UJX2 597 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 BARX2Q9UMQ3 279 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 FAF1Q9UNN5 650 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-202ENST00000367364 C15orf41Q9Y2V0 281 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 TMEM98Q9Y2Y6 226 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 MYH7BA7E2Y1 1941 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 MYH6P13533 1939 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ANKARQ7Z5J8 1434 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 RIMS2Q9UQ26 1411 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ABCA8O94911 1581 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 ADAMTS12P58397 1594 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 EVC2Q86UK5 1308 aa3.67□□□□□ -1.82
PTPRC-202ENST00000367364 CAMSAP1Q5T5Y3 1602 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 CHD4Q14839 1912 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 PNPLA6Q8IY17 1366 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 JCADQ9P266 1359 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 DLC1Q96QB1 1528 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 TET3O43151 1660 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 KIF1BO60333 1816 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 F8VZ95 297 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 NPHP1O15259 732 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 ZSCAN12O43309 604 aa3.66□□□□□ -1.82
PTPRC-202ENST00000367364 KIF5CO60282 957 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms