RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CERCAMQ5T4B2 595 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 FCRL5Q96RD9 977 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SALL4Q9UJQ4 1053 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TBC1D3BA6NDS4 549 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 EPORP19235 508 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 IRAK1BP1Q5VVH5 260 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PIH1D2Q8WWB5 315 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SPATA2Q9UM82 520 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 POLR1DQ9Y2S0 133 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 FADS2P1A8MWK0 482 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR10H3O60404 316 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CRTC3Q6UUV7 619 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SERPINA13PQ6UXR4 307 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR4K2Q8NGD2 314 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 NACC2Q96BF6 587 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PTBP2Q9UKA9 531 aaKnown RBP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TLR6Q9Y2C9 796 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PGM3O95394 542 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 MPP1Q00013 466 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF697Q5TEC3 545 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 COX4I2Q96KJ9 171 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 S100A13Q99584 98 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SNX7Q9UNH6 387 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 LGR5O75473 907 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CCNFP41002 786 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 DENND5AQ6IQ26 1287 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 EPB41L1Q9H4G0 881 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 DNM1LO00429 736 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PRNPP04156 253 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 LYNP07948 512 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TCF4P15884 667 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 IGFBP5P24593 272 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 AP3S2P59780 193 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CCNYL2Q5T2Q4 361 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SEC14L1Q92503 715 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 RAI2Q9Y5P3 530 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 INSIG1O15503 277 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC5A3P53794 718 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PRR5P85299 388 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 GPR33Q49SQ1 333 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 ACDQ96AP0 544 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 SNAPC5O75971 98 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 H6PDO95479 791 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 PRKD1Q15139 912 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CPSF6Q16630 551 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TSTD2Q5T7W7 516 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZC3H7AQ8IWR0 971 aaKnown RBP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 C10orf82Q8WW14 230 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMED5Q9Y3A6 229 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 AOC1P19801 751 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MPSTP25325 297 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 SDC2P34741 201 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MCFD2Q8NI22 146 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 OXSMQ9NWU1 459 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAN2B2Q9Y2E5 1009 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 WBP11Q9Y2W2 641 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM234BA2RU67 622 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 THRBP10828 461 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 INCA1Q0VD86 236 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PCDH19Q8TAB3 1148 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 CLCQ05315 142 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MARK4Q96L34 752 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ANKHQ9HCJ1 492 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 WBP4O75554 376 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 GNAZP19086 355 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ALFQ53S48 1182 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TNFAIP8L3Q5GJ75 292 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 RHBDF2Q6PJF5 856 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TIFABQ6ZNK6 161 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PIGUQ9H490 435 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 NECTIN3Q9NQS3 549 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 GTF2A1LQ9UNN4 478 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 COL1A1P02452 1464 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TAF4O00268 1085 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PGRMC2O15173 223 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMCC2O75069 709 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 CD52P31358 61 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MANFP55145 182 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ERVK-8P63133 956 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms