RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 COPS8Q99627 209 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SNPHO15079 494 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SERPINA1P01009 418 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 NMBRP28336 390 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ABRQ12979 859 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZZZ3Q8IYH5 903 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ITGB6P18564 788 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 CRATP43155 626 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 STARD3Q14849 445 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCTD8Q6ZWB6 473 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 C11orf65Q8NCR3 313 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCTD5Q9NXV2 234 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC5A3P53794 718 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 PAFAH1B3Q15102 231 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 USP50Q70EL3 339 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SIGLEC10Q96LC7 697 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 VPS35Q96QK1 796 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 AKAP7Q9P0M2 348 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ALDH1A2O94788 518 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 C8BP07358 591 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPR158Q5T848 1215 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 AURKBQ96GD4 344 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 BIRC8Q96P09 236 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAIM2Q9BWQ8 316 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 CFL2Q9Y281 166 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC9A3R1O14745 358 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 TAS2R39P59534 338 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 TUBA1BP68363 451 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SULT2A1Q06520 285 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 PCLAFQ15004 111 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 TUBA1AQ71U36 451 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPATA6LQ8N4H0 392 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 GMIPQ9P107 970 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 GULP1Q9UBP9 304 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 PCDHAC2Q9Y5I4 1007 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 PLEKHG6Q3KR16 790 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 HEATR4Q86WZ0 1026 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZUFSPQ96AP4 578 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF599Q96NL3 588 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 FFAR3O14843 346 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPR42O15529 346 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 SCN1BQ07699 218 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 OOSP2Q86WS3 158 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 DRAXINQ8NBI3 349 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 PIK3C3Q8NEB9 887 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 KNTC1P50748 2209 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 DAOAP59103 153 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 SIX1Q15475 284 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 ING4Q9UNL4 249 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLDN9O95484 217 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 METTL18O95568 372 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 IVDP26440 423 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 CDH13P55290 713 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 CPNE8Q86YQ8 564 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADAM2Q99965 735 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 H0YAE9 185 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 TMCC2O75069 709 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 RFPL1O75677 317 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 SRPRAP08240 638 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 EGFLAMQ63HQ2 1017 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 OR52L1Q8NGH7 329 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 FUBP3Q96I24 572 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 TMEM209Q96SK2 561 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 KAT8Q9H7Z6 458 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 DKK3Q9UBP4 350 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 CNOT6Q9ULM6 557 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 WDR37Q9Y2I8 494 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 LRP5O75197 1615 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF37AP17032 561 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 OTOP3Q7RTS5 596 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 FGD2Q7Z6J4 655 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 GRPEL2Q8TAA5 225 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 FEM1CQ96JP0 617 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 BBS4Q96RK4 519 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
CDC42BPA-202ENST00000366764 STEAP4Q687X5 459 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 PLEKHO2Q8TD55 490 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLC45A3Q96JT2 553 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 MIOSQ9NXC5 875 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 PIKFYVEQ9Y2I7 2098 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 NPEPPSL1A6NEC2 478 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF701M0R085 212 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 NDUFS2O75306 463 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 CELF2O95319 508 aaKnown RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 DBTP11182 482 aaKnown RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 SETMARQ53H47 684 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 C15orf39Q6ZRI6 1047 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLC7A6OSQ96CW6 309 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 ATAD5Q96QE3 1844 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 MC4RP32245 332 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms