RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 GAGE12GP0CL81 117 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 GAGE12IP0CL82 117 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 HOXD3P31249 432 aaPredicted RBP3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 ABATP80404 500 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 PPATQ06203 517 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 Q0VFX4 171 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 GAGE1Q13065 139 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 GAGE4Q13068 117 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SCARB2Q14108 478 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 TYW3Q6IPR3 259 aaKnown RBP3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 BRAT1Q6PJG6 821 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SLC36A4Q6YBV0 504 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 COLCA1Q6ZS62 124 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 CAMKMTQ7Z624 323 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 PIM3Q86V86 326 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 CEP57Q86XR8 500 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 NRACQ8N912 160 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 ZBTB8BQ8NAP8 495 aaPredicted RBP3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 MAGEC3Q8TD91 643 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 RND1Q92730 232 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SPATA17Q96L03 361 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SLC22A12Q96S37 553 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 DDOQ99489 341 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 ADPGKQ9BRR6 497 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 SYT17Q9BSW7 474 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 OLAHQ9NV23 265 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 IL17BQ9UHF5 180 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 TSPYL4Q9UJ04 414 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 TUBE1Q9UJT0 475 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 FZD10Q9ULW2 581 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 PCDHGA5Q9Y5G8 931 aa3.71□□□□□ -1.82
RNU6-28P-201ENST00000362378 ASTN2O75129 1339 aaPredicted RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 A0A1B0GVT2 93 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 OR6C75A6NL08 312 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 SOCS6O14544 535 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 HS3ST1O14792 307 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 TNFRSF13BO14836 293 aaPredicted RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 CLGNO14967 610 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 NDUFS4O43181 175 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 ZNF217O75362 1048 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 MOSPD3O75425 235 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 PSG1P11464 419 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 VPREB1P12018 145 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 IFNAR1P17181 557 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 HRH2P25021 359 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 LMO1P25800 156 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 COPB2P35606 906 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 CSE1LP55060 971 aaKnown RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 C21orf58P58505 322 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 TAS2R38P59533 333 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 NANOS3P60323 173 aaKnown RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 KRT83P78385 493 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 PPP2R2BQ00005 443 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 ETFDHQ16134 617 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 SNAPC1Q16533 368 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 CTF1Q16619 201 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 LEXMQ3ZCV2 418 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 FAM98BQ52LJ0 330 aaKnown RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 EFHC1Q5JVL4 640 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 LRCH2Q5VUJ6 765 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 C18orf63Q68DL7 685 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 FAM109BQ6ICB4 259 aaPredicted RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 C11orf87Q6NUJ2 197 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 ATG9AQ7Z3C6 839 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 GALNTL5Q7Z4T8 443 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 IRF2BP2Q7Z5L9 587 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 GCSAMQ8N6F7 178 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 EMC1Q8N766 993 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 RBM15BQ8NDT2 890 aaKnown RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 OR2AK2Q8NG84 335 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 OR6J1Q8NGC5 347 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 CFAP61Q8NHU2 1237 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 TAS1R2Q8TE23 839 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 ZNF830Q96NB3 372 aaPredicted RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 NEK1Q96PY6 1258 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 SLC25A33Q9BSK2 321 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 DCLK3Q9C098 648 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 ST6GALNAC4Q9H4F1 302 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 RAD21L1Q9H4I0 556 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 SLITRK6Q9H5Y7 841 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 PCDH9Q9HC56 1237 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 HAO2Q9NYQ3 351 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 DDX25Q9UHL0 483 aaKnown RBP3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 PTGDR2Q9Y5Y4 395 aa3.7□□□□□ -1.82
RNU6-28P-201ENST00000362378 A0A0U1RQJ8 604 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 FAM170AA1A519 330 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 WDR91A4D1P6 747 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 H0YIN7 160 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 ANKRD28O15084 1053 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 RECQL5O94762 991 aaPredicted RBP3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 ZWINTO95229 277 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 SRCP12931 536 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 GJA1P17302 382 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 PTAFRP25105 342 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 NMBRP28336 390 aa3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 C21orf33P30042 268 aaPredicted RBP3.69□□□□□ -1.82
RNU6-28P-201ENST00000362378 NR4A2P43354 598 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms