RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PCCBP05166 539 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 NDUFS1P28331 727 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 TPP2P29144 1249 aaPredicted RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 SLC11A1P49279 550 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 SYPL2Q5VXT5 272 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 FBXL22Q6P050 247 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 TMC5Q6UXY8 1006 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CIR1Q86X95 450 aaPredicted RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 FKBPLQ9UIM3 349 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 SMNDC1O75940 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
LDB3-202ENST00000361373 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CCNYL3P0C7X3 344 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 UGT2B15P54855 530 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CLCQ05315 142 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 FSTL4Q6MZW2 842 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 SHDQ96IW2 340 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 MARK4Q96L34 752 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 APOLD1Q96LR9 279 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 HMGXB4Q9UGU5 601 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 NPHS1O60500 1241 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 PLIN3O60664 434 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 PIAS1O75925 651 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 RASGRP1O95267 797 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 SLC35G6P0C7Q6 338 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CSKP41240 450 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CACNA2D1P54289 1103 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 TIGD2Q4W5G0 525 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 C9orf64Q5T6V5 341 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 ANKRD22Q5VYY1 191 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 SLC39A4Q6P5W5 647 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 IL12RB2Q99665 862 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 DZANK1Q9NVP4 752 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 GSTK1Q9Y2Q3 226 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 A0A0J9YYE9 177 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 DHRS12A0PJE2 317 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CENPXA8MT69 81 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 WNT9AO14904 365 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 BCL10O95999 233 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 GSTM5P46439 218 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 LPIN1Q14693 890 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 MOSPD2Q8NHP6 518 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 ADAMTS15Q8TE58 950 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 CLEC4CQ8WTT0 213 aa13.37□□□□□ -0.27
LDB3-202ENST00000361373 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
LDB3-202ENST00000361373 LYPLA1O75608 230 aaPredicted RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 MED26O95402 600 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 NMBRP28336 390 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 RPS24P62847 133 aaKnown RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 MPP1Q00013 466 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 MBLAC2Q68D91 279 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TMEM220Q6QAJ8 160 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 CLIP3Q96DZ5 547 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 MECRQ9BV79 373 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 CNTN6Q9UQ52 1028 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ZNF487B1APH4 448 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 STXBP1P61764 594 aaKnown RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 ELF3P78545 371 aaPredicted RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 MTAPQ13126 283 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 NR1D2Q14995 579 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 CA9Q16790 459 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 FAM92BQ6ZTR7 304 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ARMC8Q8IUR7 673 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 CNTD1Q8N815 330 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 SLC22A18Q96BI1 424 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 SERHL2Q9H4I8 314 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 SERHLQ9NQF3 203 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 PIGVQ9NUD9 493 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 PIRO00625 290 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ADH5P11766 374 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 GNAZP19086 355 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 RPL26P61254 145 aaKnown RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 LGALS3BPQ08380 585 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 KLF10Q13118 480 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 C16orf72Q14CZ0 275 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TOMM20Q15388 145 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms