RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 TLR5O60602 858 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 MYO1DO94832 1006 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CLK1P49759 484 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 AKR1D1P51857 326 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CSHL1Q14406 222 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 RAB39AQ14964 217 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 FUT11Q495W5 492 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 PPP4R4Q6NUP7 873 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 STRADAQ7RTN6 431 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 LRRTM3Q86VH5 581 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 DENND1CQ8IV53 801 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CARNMT1Q8N4J0 409 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 OR6K2Q8NGY2 324 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TBC1D15Q8TC07 691 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 BORCS5Q969J3 196 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 TMEM181Q9P2C4 612 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SLC8A2Q9UPR5 921 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TRIP12Q14669 1992 aaPredicted RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 FAM95CA0A1B0GW59 222 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 HAS3O00219 553 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 NME4O00746 187 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CCL16O15467 120 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 ZNF182P17025 639 aaPredicted RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 TWF1Q12792 350 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 PAFAH1B3Q15102 231 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 ZBED5Q49AG3 693 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CLLU1OSQ5K130 101 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SDE2Q6IQ49 451 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SLC39A5Q6ZMH5 540 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TAS1R1Q7RTX1 841 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 NPAS4Q8IUM7 802 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 ATPAF2Q8N5M1 289 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SGCDQ92629 289 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 NSMCE3Q96MG7 304 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 KLHL5Q96PQ7 755 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 UHRF1Q96T88 793 aaPredicted RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 ADI1Q9BV57 179 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SARS2Q9NP81 518 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 MRPL17Q9NRX2 175 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 OAZ3Q9UMX2 235 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SQORQ9Y6N5 450 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 A0A0C4DFX4 3053 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 NCOR1O75376 2440 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 HOXA2O43364 376 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 ADAM23O75077 832 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 ALDOCP09972 364 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 SLC1A2P43004 574 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CHRNA4P43681 627 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 KCNC1P48547 511 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 PSMD8P48556 350 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 MLLT10P55197 1068 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TBX4P57082 545 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 RAB10P61026 200 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 STX1BP61266 288 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TUBA4AP68366 448 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 PDCD4Q53EL6 469 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 CDH24Q86UP0 819 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 CMTR2Q8IYT2 770 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 OSCP1Q8WVF1 389 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 ELMO2Q96JJ3 720 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 SMG9Q9H0W8 520 aaKnown RBP9.05□□□□□ -0.96
TOP1-201ENST00000361337 GBA3Q9H227 469 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 UCKL1Q9NWZ5 548 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 TMEM161AQ9NX61 479 aa9.05□□□□□ -0.96
TOP1-201ENST00000361337 KANSL1LA0AUZ9 987 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 H0Y626 953 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 ARHGEF9O43307 516 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 FYNP06241 537 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 HSPA8P11142 646 aaKnown RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 PORP16435 677 aaPredicted RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 CES1P23141 567 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 RPL9P32969 192 aaKnown RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 ZNF235Q14590 738 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 POLD3Q15054 466 aaPredicted RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 VPS26BQ4G0F5 336 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 RTP2Q5QGT7 225 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 LHX8Q68G74 356 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 ERMP1Q7Z2K6 904 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 RTN4RL1Q86UN2 441 aaPredicted RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 ZDHHC17Q8IUH5 632 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
TOP1-201ENST00000361337 LGI2Q8N0V4 545 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 HM13Q8TCT9 377 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 GANCQ8TET4 914 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 PLEKHA8Q96JA3 519 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 OLFM1Q99784 485 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 SMOQ99835 787 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 NT5MQ9NPB1 228 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 GIN1Q9NXP7 522 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 USP22Q9UPT9 525 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 FADS3Q9Y5Q0 445 aa9.04□□□□□ -0.96
TOP1-201ENST00000361337 TNFRSF21O75509 655 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms