RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 B3GNT3Q9Y2A9 372 aa17.58■□□□□ 0.4
RTN4-204ENST00000357732 SEC14L2O76054 403 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 IHHQ14623 411 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 RABL3Q5HYI8 236 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 NANOGP8Q6NSW7 305 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 RIMKLAQ8IXN7 391 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 KIAA2013Q8IYS2 634 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 NSMCE2Q96MF7 247 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 KLHL5Q96PQ7 755 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 CHID1Q9BWS9 393 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 PAIP1Q9H074 479 aaKnown RBP17.57■□□□□ 0.4
RTN4-204ENST00000357732 NANOGQ9H9S0 305 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 GPN2Q9H9Y4 310 aaPredicted RBP17.57■□□□□ 0.4
RTN4-204ENST00000357732 CPA4Q9UI42 421 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 BTRCQ9Y297 605 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 MYO16Q9Y6X6 1858 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 MAGEB3O15480 346 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 DNAJB5O75953 348 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 BAIAP3O94812 1187 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 CTSHP09668 335 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 TBX4P57082 545 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 PRKG2Q13237 762 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 MTA1Q13330 715 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 EML3Q32P44 896 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 MS4A13Q5J8X5 152 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 ALG1LQ6GMV1 187 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 TMEM26Q6ZUK4 368 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 OFCC1Q8IZS5 231 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 OR56A4Q8NGH8 313 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 SH3RF2Q8TEC5 729 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 PLEKHA8Q96JA3 519 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 SUSD3Q96L08 255 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 FBXO44Q9H4M3 255 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 NMUR1Q9HB89 426 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 SEPT3Q9UH03 358 aa17.57■□□□□ 0.4
RTN4-204ENST00000357732 A0A1W2PPW3 197 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 A0A1W2PQH9 124 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 ARNTLO00327 626 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 SNAP29O95721 258 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 PORP16435 677 aaPredicted RBP17.56■□□□□ 0.4
RTN4-204ENST00000357732 PSMA3P25788 255 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 BRCC3P46736 316 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 PGFP49763 221 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 ARSFP54793 590 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 NFATC3Q12968 1075 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 PAGE3Q5JUK9 113 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 MORN1Q5T089 497 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 ZFAND4Q86XD8 727 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 HASPINQ8TF76 798 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 TRUB1Q8WWH5 349 aaKnown RBP17.56■□□□□ 0.4
RTN4-204ENST00000357732 AURKBQ96GD4 344 aaPredicted RBP17.56■□□□□ 0.4
RTN4-204ENST00000357732 BTN2A3PQ96KV6 586 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 PLXNA3P51805 1871 aa17.56■□□□□ 0.4
RTN4-204ENST00000357732 LRRC14BA6NHZ5 514 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 C16orf96A6NNT2 1141 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 CCL22O00626 93 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 GPR182O15218 404 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 RHOBTB1O94844 696 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 C1RP00736 705 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 RAP2AP10114 183 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 SERINC3Q13530 473 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 DAG1Q14118 895 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 FGD3Q5JSP0 725 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 ANKRD26P1Q6NSI1 321 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 AFTPHQ6ULP2 937 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 CD300LGQ6UXG3 332 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 TFAP2DQ7Z6R9 452 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 IFNEQ86WN2 208 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 PGBD5Q8N414 524 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 POP5Q969H6 163 aaKnown RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 VPS33AQ96AX1 596 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 SEMA4BQ9NPR2 832 aaPredicted RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 NLE1Q9NVX2 485 aaPredicted RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 PCTPQ9UKL6 214 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 KCTD3Q9Y597 815 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 PCDHGA11Q9Y5H2 935 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 DRGXA6NNA5 263 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 RAMP2O60895 175 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 ABCB7O75027 752 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 ECI2O75521 394 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 HOXB6P17509 224 aaKnown RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 HRH2P25021 359 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 MAPKAPK2P49137 400 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 PHEXP78562 749 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 TUSC3Q13454 348 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 SEMA3AQ14563 771 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 FAM98BQ52LJ0 330 aaKnown RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 TTC23Q5W5X9 447 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 PNPLA1Q8N8W4 532 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 BLOC1S5Q8TDH9 187 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 FUBP1Q96AE4 644 aaKnown RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 ACDQ96AP0 544 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 CCDC115Q96NT0 180 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 SEMA3CQ99985 751 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 HPS4Q9NQG7 708 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 HEBP1Q9NRV9 189 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms