RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KIFC1Q9BW19 673 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 PCDHAC1Q9H158 963 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 GBA3Q9H227 469 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 SEMA6AQ9H2E6 1030 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 LIN28AQ9H9Z2 209 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ADA2Q9NZK5 511 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CNOT6Q9ULM6 557 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CLEC4EQ9ULY5 219 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 A0A087WXM4 84 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 AP3B1O00203 1094 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 NCAM2O15394 837 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 MAGEB3O15480 346 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 RAMP2O60895 175 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ACADVLP49748 655 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ZBTB17Q13105 803 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ADAM15Q13444 863 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 PIWIL4Q7Z3Z4 852 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 DNAAF3Q8N9W5 541 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 WFDC5Q8TCV5 224 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 RSPRY1Q96DX4 576 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 FAR2Q96K12 515 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ACSS2Q9NR19 701 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 DLGAP1O14490 977 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 MAFKO60675 156 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 JCHAINP01591 159 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 TCN1P20061 433 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 MYF6P23409 242 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 GABRB3P28472 473 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 HTR7P34969 479 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ETFBP38117 255 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 STT3AP46977 705 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 CTBSQ01459 385 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 USP10Q14694 798 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 FAM78AQ5JUQ0 283 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 PCDH20Q8N6Y1 951 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ISOC1Q96CN7 298 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 MEAF6Q9HAF1 191 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 SPAG4Q9NPE6 437 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 H3BQ06 376 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 PHGDHO43175 533 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 MTSS1O43312 755 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 AKAP10O43572 662 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 RHOCP08134 193 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 NMBRP28336 390 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ENTPD1P49961 510 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ATP4BP51164 291 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 CDH4P55283 916 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 PLOD1Q02809 727 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 PRKCQQ04759 706 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 SAMD4BQ5PRF9 694 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 Q7L0L9 218 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 GPR141Q7Z602 305 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 PATL1Q86TB9 770 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 GOLM1Q8NBJ4 401 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF420Q8TAQ5 688 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ZUFSPQ96AP4 578 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF419Q96HQ0 510 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 SCYL1Q96KG9 808 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 TCF12Q99081 682 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 UBP1Q9NZI7 540 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 FAF1Q9UNN5 650 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 ACOT9Q9Y305 439 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 NUP210Q8TEM1 1887 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-202ENST00000357348 A0A1B0GVM2 712 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 TTC24A2A3L6 582 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms