RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TSHRP16473 764 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 PTPRNQ16849 979 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 GCNT6Q5T4J0 391 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 SMARCD3Q6STE5 483 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 USP30Q70CQ3 517 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 METTL8Q9H825 291 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 CXorf21Q9HAI6 301 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 SEC14L3Q9UDX4 400 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 LOC100509620A0A075B734 347 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 TSPAN1O60635 241 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 KLF10Q13118 480 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 TMEM119Q4V9L6 283 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 KHDC1Q4VXA5 237 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 CRTC2Q53ET0 693 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 DENND1CQ8IV53 801 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 HDDC3Q8N4P3 179 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 LNX1Q8TBB1 728 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 UFD1Q92890 307 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 PURBQ96QR8 312 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 MRPL45Q9BRJ2 306 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 TMEM109Q9BVC6 243 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 ABCC13Q9NSE7 274 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 KLRC4O43908 158 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 GOT1P17174 413 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 GRIK4Q16099 956 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 WSCD2Q2TBF2 565 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 RTL4Q6ZR62 310 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 CADM2Q8N3J6 435 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 SMG7Q92540 1137 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 EDARQ9UNE0 448 aa10.97□□□□□ -0.65
GTF3C1-201ENST00000356183 SIGLEC16A6NMB1 481 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 FADS2P1A8MWK0 482 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 C9JVG2 144 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 MC4RP32245 332 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 GPALPP1Q8IXQ4 340 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM151AQ8WW52 585 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 AIF1LQ9BQI0 150 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ISM1B1AKI9 464 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 PAPSS2O95340 614 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 BPGMP07738 259 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ITPKAP23677 461 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 RAB15P59190 212 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ELP6Q0PNE2 266 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 CLEC6AQ6EIG7 209 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 C4orf19Q8IY42 314 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 CPSF7Q8N684 471 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ZFAND2BQ8WV99 257 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 SLC39A8Q9C0K1 460 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 SLC22A4Q9H015 551 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 C12orf65Q9H3J6 166 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ANXA2P2A6NMY6 339 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 QSOX1O00391 747 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 MAPTP10636 758 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 TUBG1P23258 451 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 PPP3R1P63098 170 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 RPP38P78345 283 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 CXorf40BQ96DE9 158 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 SNRNP25Q9BV90 132 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 BRINP2Q9C0B6 783 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 NXF3Q9H4D5 531 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 IGFLR1Q9H665 355 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 COQ10BQ9H8M1 238 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 TESMINQ9Y4I5 508 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 VIRMAQ69YN4 1812 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 CPS1P31327 1500 aa10.96□□□□□ -0.65
GTF3C1-201ENST00000356183 FXYD6-FXYD2A0A087WZ82 144 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 TCRBV9S1A1TA0A576 114 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 A8MV72 311 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 BPNT1O95861 308 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 PPM1AP35813 382 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 IGFALSP35858 605 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 CCNFP41002 786 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 ZNF132P52740 706 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 ZNF135P52742 658 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 DCST1Q5T197 706 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 LRRC55Q6ZSA7 311 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 AMIGO1Q86WK6 493 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 OR10H4Q8NGA5 316 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 ACMSDQ8TDX5 336 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 GATAD2BQ8WXI9 593 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 C1QTNF7Q9BXJ2 289 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 FXYD6Q9H0Q3 95 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 FRMPD1Q5SYB0 1578 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 HCN1O60741 890 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 PRKD3O94806 890 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 CETPP11597 493 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 MAPK12P53778 367 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 ADNP2Q6IQ32 1131 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 UBE2R2Q712K3 238 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 OR4L1Q8NH43 312 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 TWIST2Q8WVJ9 160 aa10.96□□□□□ -0.66
GTF3C1-201ENST00000356183 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.661e-7■■■■□ 24.7
GTF3C1-201ENST00000356183 DNASE1L2Q92874 299 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms