RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TANGO2Q6ICL3 276 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 FAM151BQ6UXP7 276 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 RASGRP3Q8IV61 690 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 IKZF3Q9UKT9 509 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 OTOL1A6NHN0 477 aaPredicted RBP17.05■□□□□ 0.32
VPS13B-201ENST00000355155 ARNTLO00327 626 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 PRNPP04156 253 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 MMP12P39900 470 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 E2F5Q15329 346 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 ZNF765Q7L2R6 523 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 TAS2R42Q7RTR8 314 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CYP2U1Q7Z449 544 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 SUGP1Q8IWZ8 645 aaKnown RBP17.05■□□□□ 0.32
VPS13B-201ENST00000355155 TRAM1L1Q8N609 369 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 NXPE3Q969Y0 559 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CLPBQ9H078 707 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 C1orf21Q9H246 121 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 ARL8BQ9NVJ2 186 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CLEC1BQ9P126 229 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 MARCOQ9UEW3 520 aaPredicted RBP17.05■□□□□ 0.32
VPS13B-201ENST00000355155 KITP10721 976 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ITGB7P26010 798 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 RIPK1Q13546 671 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ARSIQ5FYB1 569 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 GET4Q7L5D6 327 aaPredicted RBP17.04■□□□□ 0.32
VPS13B-201ENST00000355155 TERB1Q8NA31 727 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 NUDT4Q9NZJ9 180 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 PPM1HQ9ULR3 514 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 A0A0U1RQS6 177 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 AP2A2O94973 939 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 POU3F3P20264 500 aaPredicted RBP17.04■□□□□ 0.32
VPS13B-201ENST00000355155 SLC6A11P48066 632 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ST8SIA6P61647 398 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 RUNX3Q13761 415 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 HENMT1Q5T8I9 393 aaKnown RBP17.04■□□□□ 0.32
VPS13B-201ENST00000355155 HOMEZQ8IX15 550 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 MAPK15Q8TD08 544 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ACTRT2Q8TDY3 377 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 ZNF483Q8TF39 744 aaPredicted RBP17.04■□□□□ 0.32
VPS13B-201ENST00000355155 CHFRQ96EP1 664 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 THAP10Q9P2Z0 257 aaPredicted RBP17.04■□□□□ 0.32
VPS13B-201ENST00000355155 TMPRSS11EQ9UL52 423 aa17.04■□□□□ 0.32
VPS13B-201ENST00000355155 NEMP2A6NFY4 417 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 NPC1O15118 1278 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■■□□□ 11.6
VPS13B-201ENST00000355155 ALDH18A1P54886 795 aaKnown RBP17.03■□□□□ 0.32
VPS13B-201ENST00000355155 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 TTC23LQ6PF05 361 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 MICALL1Q8N3F8 863 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
VPS13B-201ENST00000355155 TIFAQ96CG3 184 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 KLHL29Q96CT2 875 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 PRR11Q96HE9 360 aaPredicted RBP17.03■□□□□ 0.32
VPS13B-201ENST00000355155 RDH14Q9HBH5 336 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 PCDH12Q9NPG4 1184 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 LINC01565O15544 149 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 MGRN1O60291 552 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 RAB44Q7Z6P3 723 aaPredicted RBP17.03■□□□□ 0.32
VPS13B-201ENST00000355155 SORCS1Q8WY21 1168 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 PBXIP1Q96AQ6 731 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 MYADMQ96S97 322 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 CRLS1Q9UJA2 301 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 FAM50BQ9Y247 325 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 PRSS21Q9Y6M0 314 aa17.03■□□□□ 0.32
VPS13B-201ENST00000355155 SPINT1O43278 529 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 MAGEC1O60732 1142 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 GM2AP17900 193 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 B4GALNT1Q00973 533 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 PPP1R3AQ16821 1122 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 CHSY3Q70JA7 882 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 TTC7BQ86TV6 843 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 TREML1Q86YW5 311 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 AFAP1L2Q8N4X5 818 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 PDPRQ8NCN5 879 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 DDHD1Q8NEL9 900 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 UBTD2Q8WUN7 234 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 COQ10AQ96MF6 247 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 RAB3IPQ96QF0 476 aaPredicted RBP17.02■□□□□ 0.32
VPS13B-201ENST00000355155 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 TAGLN3Q9UI15 199 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 ST14Q9Y5Y6 855 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 C16orf96A6NNT2 1141 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 TARSP26639 723 aaKnown RBP17.02■□□□□ 0.32
VPS13B-201ENST00000355155 PCBP2Q15366 365 aaKnown RBP eCLIP17.02■□□□□ 0.324e-7■■■■□ 26.5
VPS13B-201ENST00000355155 TMEM52BQ4KMG9 183 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 CFAP157Q5JU67 520 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 ATAT1Q5SQI0 421 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 CYHR1Q6ZMK1 362 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 RNF165Q6ZSG1 346 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 NEK10Q6ZWH5 1172 aa17.02■□□□□ 0.32
VPS13B-201ENST00000355155 ADAMTSL2Q86TH1 951 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms