RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TMED1Q13445 227 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 KLHL35Q6PF15 583 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 BIRC7Q96CA5 298 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 BIRC8Q96P09 236 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 ASB2Q96Q27 587 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIB3Q96RU7 358 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 FBXO44Q9H4M3 255 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 AIG1Q9NVV5 245 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 FNIP2Q9P278 1114 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 ZFC3H1O60293 1989 aaKnown RBP17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 A0A087WXM4 84 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 CCDC154A6NI56 674 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 SLC22A3O75751 556 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 ASGR1P07306 291 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 PCNAP12004 261 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 HRH2P25021 359 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 RFC2P35250 354 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 ARL1P40616 181 aaPredicted RBP17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 BNIP2Q12982 314 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 RCAN2Q14206 197 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 SELPLGQ14242 412 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIP4Q15650 581 aaPredicted RBP17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 CYBRD1Q53TN4 286 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 CLLU1OSQ5K130 101 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 VARS2Q5ST30 1063 aaKnown RBP17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 GPR107Q5VW38 600 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 PRMT9Q6P2P2 845 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 GIPC2Q8TF65 315 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 FATE1Q969F0 183 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 VPS50Q96JG6 964 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 PLEKHG4BQ96PX9 1271 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 NPLQ9BXD5 320 aaPredicted RBP17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIM15Q9C019 465 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 DERL2Q9GZP9 239 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 LTB4R2Q9NPC1 389 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 OAZ2O95190 189 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RASAL1O95294 804 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PRLP01236 227 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RPS17P08708 135 aaKnown RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 SLC6A4P31645 630 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RPS24P62847 133 aaKnown RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 TYSND1Q2T9J0 566 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 ANKDD1AQ495B1 522 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 TMEM214Q6NUQ4 689 aaKnown RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 LYSMD3Q7Z3D4 306 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 SPRED1Q7Z699 444 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 CCDC97Q96F63 343 aaPredicted RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PPM1MQ96MI6 270 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RNF145Q96MT1 663 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 SEPT5Q99719 369 aaPredicted RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 C9orf16Q9BUW7 83 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PDFQ9HBH1 243 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 ZFYVE28Q9HCC9 887 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 HCSTQ9UBK5 93 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PCTPQ9UKL6 214 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PTPRDP23468 1912 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 LCHNA4D1U4 455 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 NDST3O95803 873 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 TSPAN12O95859 305 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 IGHA2P01877 340 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 HOXD9P28356 352 aaPredicted RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 HTR6P50406 440 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 POLR2JP52435 117 aaKnown RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 ZNF140P52738 457 aaPredicted RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RAD51Q06609 339 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PARP15Q460N3 678 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 RSPO2Q6UXX9 243 aaPredicted RBP17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 Q6ZSR9 355 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 GLT6D1Q7Z4J2 308 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PROKR1Q8TCW9 393 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.93■□□□□ 0.461e-9■■■■■ 31.4
PTP4A3-202ENST00000349124 CHID1Q9BWS9 393 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 CCDC68Q9H2F9 335 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 CXorf21Q9HAI6 301 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 LMCD1Q9NZU5 365 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 DOCK4Q8N1I0 1966 aa17.93■□□□□ 0.46
PTP4A3-202ENST00000349124 PRR35P0CG20 571 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 BMP1P13497 986 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 POLR2IP36954 125 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 DGKQP52824 942 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ZBED5Q49AG3 693 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 KCTD21Q4G0X4 260 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 CTXN3Q4LDR2 81 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 GPR180Q86V85 440 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 FNDC5Q8NAU1 212 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 SNRNP27Q8WVK2 155 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 C8orf48Q96LL4 319 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 POLR1BQ9H9Y6 1135 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 SYTL2Q9HCH5 934 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 FKBPLQ9UIM3 349 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 SYNCRIPO60506 623 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 SNX2O60749 519 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 OGNP20774 298 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 CD247P20963 164 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 TACR2P21452 398 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 MTPNP58546 118 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ERVPABLB-1P60509 514 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 IRF5Q13568 498 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 NEDD8Q15843 81 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms