RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SMARCD2Q92925 531 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 OTOL1A6NHN0 477 aaPredicted RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 ITGA10O75578 1167 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 OVCA2Q8WZ82 227 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 BAP1Q92560 729 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 PNPLA2Q96AD5 504 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 RABL2AQ9UBK7 228 aaPredicted RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 RABL2BQ9UNT1 228 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 UROSP10746 265 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 KLRC1P26715 233 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 CHAF1BQ13112 559 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 PSKH2Q96QS6 385 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF878C9JN71 531 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 AIREO43918 545 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 ANGPTL1O95841 491 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 HSPA14Q0VDF9 509 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 RPL38P63173 70 aaKnown RBP17.52■□□□□ 0.4
SMAD4-201ENST00000342988 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 AMHP03971 560 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 BNIP1Q12981 228 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 FAM131BQ86XD5 332 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 RPLP0P05388 317 aaKnown RBP17.52■□□□□ 0.4
SMAD4-201ENST00000342988 CYP2C18P33260 490 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 PLEKHG4Q58EX7 1191 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 C12orf43Q96C57 262 aaKnown RBP17.52■□□□□ 0.4
SMAD4-201ENST00000342988 SLC39A1Q9NY26 324 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 TBX22Q9Y458 520 aa17.52■□□□□ 0.4
SMAD4-201ENST00000342988 C22orf31O95567 290 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 ADRA2BP18089 450 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 SULT2A1Q06520 285 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 IDNKQ5T6J7 187 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 ZSWIM2Q8NEG5 633 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 KCNH7Q9NS40 1196 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 FAM228BP0C875 321 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 SLC6A9P48067 706 aa17.52■□□□□ 0.39
SMAD4-201ENST00000342988 SLC7A6OSQ96CW6 309 aaPredicted RBP17.52■□□□□ 0.39
SMAD4-201ENST00000342988 EBNA1BP2Q99848 306 aaKnown RBP17.52■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF717Q9BY31 904 aaPredicted RBP17.52■□□□□ 0.39
SMAD4-201ENST00000342988 HSPA12AO43301 675 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 DCDC1P59894 354 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 C12orf45Q8N5I9 185 aaPredicted RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ZBTB8BQ8NAP8 495 aaPredicted RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 NOA1Q8NC60 698 aaKnown RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ADCY4Q8NFM4 1077 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 OR51D1Q8NGF3 324 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 STRA6Q9BX79 667 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ALKBH4Q9NXW9 302 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 TGDSO95455 350 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 PSEN1P49768 467 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ATAD3CQ5T2N8 411 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ASB18Q6ZVZ8 466 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 USP30Q70CQ3 517 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 RIOX2Q8IUF8 465 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 SKA3Q8IX90 412 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 TARS2Q9BW92 718 aaKnown RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 GTPBP2Q9BX10 602 aaKnown RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ADAM7Q9H2U9 754 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 GHRLQ9UBU3 117 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 TSTD3H0UI37 97 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 BRMS1LQ5PSV4 323 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 GPAT4Q86UL3 456 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 SLC47A2Q86VL8 602 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 SVOPLQ8N434 492 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 PRKD3O94806 890 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 GLDCP23378 1020 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 SLC9B2Q86UD5 537 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 RBFAQ8N0V3 343 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 CISHQ9NSE2 258 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 DGKBQ9Y6T7 804 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 FABP3P05413 133 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 HOXB9P17482 250 aaPredicted RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 LCN1P31025 176 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 S100A7P31151 101 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 PLEKHG6Q3KR16 790 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 C9orf64Q5T6V5 341 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ACTL9Q8TC94 416 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 TRBC1P01850 177 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 SLC2A2P11168 524 aaPredicted RBP17.51■□□□□ 0.39
SMAD4-201ENST00000342988 GCNT6Q5T4J0 391 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 HID1Q8IV36 788 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ASB15Q8WXK1 588 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 RAB10P61026 200 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 LAPTM5Q13571 262 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 P2RY8Q86VZ1 359 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 OR4C15Q8NGM1 316 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF510Q9Y2H8 683 aa17.51■□□□□ 0.39
SMAD4-201ENST00000342988 FAM234BA2RU67 622 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ITGAVP06756 1048 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 XKRXQ6PP77 449 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 PARP8Q8N3A8 854 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 MFSD3Q96ES6 412 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms