RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 HMGB4Q8WW32 186 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 EFR3BQ9Y2G0 817 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 IQCMA0A1B0GVH7 501 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 A0A1W2PRU2 124 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ASLP04424 464 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 SAGP10523 405 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 DHPSP49366 369 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ATP1A4Q13733 1029 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 RAB30Q15771 203 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 FAM91A1Q658Y4 838 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 SH3RF2Q8TEC5 729 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 FNIP1Q8TF40 1166 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CLEC4DQ8WXI8 215 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 COPS7AQ9UBW8 275 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 LRCH4O75427 683 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 BMP6P22004 513 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 MAPK12P53778 367 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 CYP4F3Q08477 520 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 SPATA19Q7Z5L4 167 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 LDB1Q86U70 411 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 SERPINA9Q86WD7 417 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 QKIQ96PU8 341 aaKnown RBP eCLIP14.9□□□□□ -0.025e-6■■■■□ 24.8
UBE3B-202ENST00000342494 TM7SF2O76062 418 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 IPO13O94829 963 aaKnown RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 TNFRSF8P28908 595 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 LRRN4CLQ8ND94 238 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 SLC47A1Q96FL8 570 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 NUDT4Q9NZJ9 180 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 RBPJLQ9UBG7 517 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 FBXW2Q9UKT8 454 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 OR5F1O95221 314 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 FSHRP23945 695 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 AQP1P29972 269 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ZBTB6Q15916 424 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 OR2T12Q8NG77 320 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 TAPBPLQ9BX59 468 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 IPPKQ9H8X2 491 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ERVK-11Q9UQG0 969 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 RCCD1A6NED2 376 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 AP2A1O95782 977 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 SERPINA6P08185 405 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ANXA4P09525 319 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 GDI1P31150 447 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 DAOAP59103 153 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 STXBP1P61764 594 aaKnown RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 IL10RBQ08334 325 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 PTGES3Q15185 160 aaKnown RBP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ATCAYQ86WG3 371 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ECHDC2Q86YB7 292 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 PMEPA1Q969W9 287 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 FUBP3Q96I24 572 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE3B-202ENST00000342494 MECRQ9BV79 373 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 SRRDQ9UH36 339 aa14.9□□□□□ -0.02
UBE3B-202ENST00000342494 ENPP3O14638 875 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SUZ12Q15022 739 aaKnown RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ZNF730Q6ZMV8 503 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 BEND5Q7L4P6 421 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 NET1Q7Z628 596 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ALG3Q92685 438 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ZNF184Q99676 751 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 DHRS12A0PJE2 317 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SNX3O60493 162 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 COL6A2P12110 1019 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 AVPR1BP47901 424 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 CAMK1Q14012 370 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ATXN7L2Q5T6C5 722 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ISLR2Q6UXK2 745 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SNX20Q7Z614 316 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SPATA22Q8NHS9 363 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PNPT1Q8TCS8 783 aaKnown RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PNPOQ9NVS9 261 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 HEBP2Q9Y5Z4 205 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 CHRNGP07510 517 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PSMG2Q969U7 264 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 FGFBP2Q9BYJ0 223 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 EPB41L1Q9H4G0 881 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PNPLA8Q9NP80 782 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ATRNO75882 1429 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 AOC2O75106 756 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ADSSP30520 456 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 HSPA7P48741 367 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PDGFRLQ15198 375 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 VPS26BQ4G0F5 336 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PTCHD4Q6ZW05 846 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 C12orf66Q96MD2 445 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 PTPN18Q99952 460 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 ST6GALNAC4Q9H4F1 302 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 CRNNQ9UBG3 495 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 CNOT6Q9ULM6 557 aaKnown RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SAMD4AQ9UPU9 718 aaKnown RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 TCAF1Q9Y4C2 921 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 A0A0J9YYE9 177 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 NRP1O14786 923 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms