RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 OR6B3Q8NGW1 331 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 DYNC2LI1Q8TCX1 351 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 WNT8BQ93098 351 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 MUL1Q969V5 352 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 BIRC7Q96CA5 298 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 RIPOR3Q96MK2 946 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TBCBQ99426 244 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 ERVMER34-1Q9H9K5 563 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 RNF103-CHMP3A0A140T963 221 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 GABARAPO95166 117 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 RASAL1O95294 804 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CTSHP09668 335 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CYP2A7P20853 494 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 PRKCHP24723 683 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ALDH4A1P30038 563 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 TALDO1P37837 337 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 HAAOP46952 286 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ETV1P50549 477 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 PTPN5P54829 565 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ADARB1P78563 741 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 SLC25A11Q02978 314 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 TRAP1Q12931 704 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 IRF5Q13568 498 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 SOWAHAQ2M3V2 549 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 STXBP5Q5T5C0 1151 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 C9orf57Q5W0N0 161 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 SPOCD1Q6ZMY3 1216 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 RCOR2Q8IZ40 523 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CPA6Q8N4T0 437 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 OR7A2PQ8NGA2 310 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 OR4M1Q8NGD0 313 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 PBXIP1Q96AQ6 731 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ZFP42Q96MM3 310 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 RNF208Q9H0X6 261 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 IFT22Q9H7X7 185 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 EIF3KQ9UBQ5 218 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 PCDHGB3Q9Y5G1 929 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 hCG_1818297A0A087WSY0 165 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 A0A0B4J203 849 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 M0R3G1 203 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 NEMP1O14524 444 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 EI24O14681 340 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 NOS1APO75052 506 aaPredicted RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 SNAP29O95721 258 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 GNRH1P01148 92 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 HMGCRP04035 888 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 AKR1A1P14550 325 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ATF6P18850 670 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 LMO2P25791 158 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CD68P34810 354 aaPredicted RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 NRLP54845 237 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 GP2P55259 537 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTN3-203ENST00000341307 ZNF33BQ06732 778 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 CDO1Q16878 200 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 TMEM198Q66K66 360 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 FIP1L1Q6UN15 594 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 FAM183BPQ6ZVS7 135 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 SMG8Q8ND04 991 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 OR13J1Q8NGT2 312 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 URGCPQ8TCY9 931 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 B3GNT5Q9BYG0 378 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 AGPAT4Q9NRZ5 378 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ATP6V1HQ9UI12 483 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 FBXO5Q9UKT4 447 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 OAZ3Q9UMX2 235 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
RTN3-203ENST00000341307 IPPQ9Y573 584 aa11.78□□□□□ -0.52
RTN3-203ENST00000341307 ATG13O75143 517 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 TRIM16O95361 564 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 IGHA2P01877 340 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 SHMT2P34897 504 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SOX9P48436 509 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SERPINB10P48595 397 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 AFF1P51825 1210 aaKnown RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 PON2Q15165 354 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 OR6B2Q6IFH4 312 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 PAGE2Q7Z2X7 111 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 NOXA1Q86UR1 476 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 NT5DC4Q86YG4 428 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SCUBE3Q8IX30 993 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 NIPA2Q8N8Q9 360 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 FLCNQ8NFG4 579 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 BEST2Q8NFU1 509 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 AGR3Q8TD06 166 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 DEFB118Q96PH6 123 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SLIRPQ9GZT3 109 aaKnown RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 BAG5Q9UL15 447 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms