RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CNTD1Q8N815 330 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 EXD3Q8N9H8 876 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KIAA1143Q96AT1 154 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 DNAJC7Q99615 494 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 SLC25A51Q9H1U9 297 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 OR2AG1Q9H205 316 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 OSGEPL1Q9H4B0 414 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 EPB41L1Q9H4G0 881 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 NHEJ1Q9H9Q4 299 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 OCIAD1Q9NX40 245 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 TMEM9Q9P0T7 183 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 PDP2Q9P2J9 529 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 ATXN10Q9UBB4 475 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CPNE7Q9UBL6 633 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 SHOC2Q9UQ13 582 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 B3GALT1Q9Y5Z6 326 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KMOO15229 486 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 VIPP01282 170 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 KRT1P04264 644 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ZNF8P17098 575 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-202ENST00000337571 VCLP18206 1134 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 MAP4P27816 1152 aaKnown RBP10.53□□□□□ -0.72
CAPN3-202ENST00000337571 CSF2RBP32927 897 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 SLC1A1P43005 524 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 NR2C2P49116 596 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 DYNLT1P63172 113 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 MC2RQ01718 297 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ZBTB17Q13105 803 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 TFDP2Q14188 446 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 INSCQ1MX18 579 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-202ENST00000337571 LRRC38Q5VT99 294 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ANKS6Q68DC2 871 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 PDPK2PQ6A1A2 396 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 SLC9A4Q6AI14 798 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 TMC3Q7Z5M5 1100 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 TRAM1L1Q8N609 369 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 TTC25Q96NG3 672 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 WDR24Q96S15 920 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 EFHD1Q9BUP0 239 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 FBXO8Q9NRD0 319 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 KLC4Q9NSK0 619 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 ABHD10Q9NUJ1 306 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 KLHL3Q9UH77 587 aa10.53□□□□□ -0.72
CAPN3-202ENST00000337571 A0A0A6YYK5 440 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 POLR1CO15160 346 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 SPOPO43791 374 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 VEGFDO43915 354 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 RAD1O60671 282 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 PMPCBO75439 489 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CDK14O94921 469 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 NDST3O95803 873 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 PIRTP0C851 137 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 LIFP15018 202 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 AMD1P17707 334 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 XRCC1P18887 633 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CCR10P46092 362 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CLCNKAP51800 687 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 DCDC1P59894 354 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GTF2H3Q13889 308 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 TEX44Q53QW1 395 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF648Q5T619 568 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 BORAQ6PGQ7 559 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 NPNTQ6UXI9 565 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 LRRTM4Q86VH4 590 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 NLGN4XQ8N0W4 816 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GPR26Q8NDV2 337 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 NLGN4YQ8NFZ3 816 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GDAP1Q8TB36 358 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GLYATL1Q969I3 302 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CHP1Q99653 195 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CTRCQ99895 268 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 TRIT1Q9H3H1 467 aaKnown RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 CLMPQ9H6B4 373 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 GLOD4Q9HC38 313 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 SPTLC3Q9NUV7 552 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF711Q9Y462 761 aa10.52□□□□□ -0.73
CAPN3-202ENST00000337571 PCYT1BQ9Y5K3 369 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-202ENST00000337571 SDK2Q58EX2 2172 aa10.51□□□□□ -0.73
CAPN3-202ENST00000337571 C3orf70A6NLC5 250 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-202ENST00000337571 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
CAPN3-202ENST00000337571 MTSS1O43312 755 aa10.51□□□□□ -0.73
CAPN3-202ENST00000337571 PPFIA2O75334 1257 aa10.51□□□□□ -0.73
CAPN3-202ENST00000337571 UBXN7O94888 489 aa10.51□□□□□ -0.73
CAPN3-202ENST00000337571 MT-CYBP00156 380 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-202ENST00000337571 WT1P19544 449 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms