RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NMUR1Q9HB89 426 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 RGS10O43665 173 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 IL1BP01584 269 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 CHRNA4P43681 627 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GLUD2P49448 558 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GNA12Q03113 381 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 EGFLAMQ63HQ2 1017 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 DEF8Q6ZN54 512 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 SLC34A3Q8N130 599 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 TEFMQ96QE5 360 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 TWNKQ96RR1 684 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 C1QTNF7Q9BXJ2 289 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 PCDHAC1Q9H158 963 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 DGKBQ9Y6T7 804 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 PHLPP1O60346 1717 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GOT2P00505 430 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 PRG2P13727 222 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 RPIAP49247 311 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 MTAPQ13126 283 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 OR7D4Q8NG98 312 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 PLEKHO2Q8TD55 490 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 LRRC15Q8TF66 581 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 PSMG2Q969U7 264 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 DNAJC11Q9NVH1 559 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 CMTM6Q9NX76 183 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 ALOX5P09917 674 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 NCK1P16333 377 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 BUD31P41223 144 aaPredicted RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 CCT3P49368 545 aaKnown RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 MANFP55145 182 aaKnown RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 QPRTQ15274 297 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 PYDC2Q56P42 97 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 LDLRAP1Q5SW96 308 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 CAMKK1Q8N5S9 505 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 NKX1-2Q9UD57 310 aaPredicted RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 AP3D1O14617 1153 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 ITM2AO43736 263 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 IDH3BO43837 385 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SLC1A2P43004 574 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SKP1P63208 163 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 HLA-DQA1Q5Y7H0 255 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 GALNT15Q8N3T1 639 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 NODALQ96S42 347 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 IFT80Q9P2H3 777 aaPredicted RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 H6PDO95479 791 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 CLDN9O95484 217 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 CKMT2P17540 419 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
RTN4-202ENST00000337526 CAPGP40121 348 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 CDH24Q86UP0 819 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 OR4A15Q8NGL6 344 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 OR10A6Q8NH74 314 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 BRSK1Q8TDC3 778 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 SGK2Q9HBY8 427 aa13.65□□□□□ -0.22
RTN4-202ENST00000337526 LOC110117498-PIK3R3F6TDL0 507 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TFECO14948 347 aaPredicted RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 DNAJA2O60884 412 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 C22orf31O95567 290 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 THOP1P52888 689 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 RABGGTBP53611 331 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 POU5F1Q01860 360 aaKnown RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 OGDHQ02218 1023 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 GAD2Q05329 585 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 BIKQ13323 160 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 SYPL2Q5VXT5 272 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 CPNE9Q8IYJ1 553 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 OXSMQ9NWU1 459 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 KIAA1522Q9P206 1035 aaPredicted RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 TEX264Q9Y6I9 313 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 SLC22A2O15244 555 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TULP3O75386 442 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 PRAMEF1O95521 474 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 COL6A1P12109 1028 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 GABRR2P28476 465 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 IRF9Q00978 393 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 GALNT18Q6P9A2 607 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms