RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 IL7RP16871 459 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TRAP1Q12931 704 aaKnown RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TREML2Q5T2D2 321 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 SETD9Q8NE22 299 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 C19orf18Q8NEA5 215 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TADA1Q96BN2 335 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 KLHL5Q96PQ7 755 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 FAM126AQ9BYI3 521 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ZYG11BQ9C0D3 744 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 OSGEPL1Q9H4B0 414 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ARHGEF4Q9NR80 690 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 UXTQ9UBK9 157 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 OGDHLQ9ULD0 1010 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 U3KQV3 271 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 SOCS2O14508 198 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 MFSD11O43934 449 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 NBNO60934 754 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 PGK1P00558 417 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 NCK1P16333 377 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ARL2P36404 184 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 PRKG2Q13237 762 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TOP3AQ13472 1001 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TEX44Q53QW1 395 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 CCBE1Q6UXH8 406 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TRMT11Q7Z4G4 463 aaKnown RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TRPM4Q8TD43 1214 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ATL1Q8WXF7 558 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 MTFMTQ96DP5 389 aaKnown RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ZFP14Q9HCL3 533 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 CHRAC1Q9NRG0 131 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 SESN1Q9Y6P5 492 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 PRR23D1E9PI22 279 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 YES1P07947 543 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 PRR23D2P0DMB1 279 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 CYP4B1P13584 511 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 KLHL12Q53G59 568 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 CYP20A1Q6UW02 462 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 LILRA2Q8N149 483 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 SCML4Q8N228 414 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 TMEM132CQ8N3T6 1108 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 CLEC4DQ8WXI8 215 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 SH3YL1Q96HL8 342 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ASB8Q9H765 288 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 BOLA1Q9Y3E2 137 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 MYH11P35749 1972 aa15.97■□□□□ 0.15
NPHP3-201ENST00000337331 MED1Q15648 1581 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-201ENST00000337331 ARPC4-TTLL3A0A0A6YYG9 625 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 MOXD2PA6NHM9 499 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 THRBP10828 461 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 TPSB2P20231 275 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CD247P20963 164 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CYP4F2P78329 520 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CYP4F3Q08477 520 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 NCF4Q15080 339 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 TPSAB1Q15661 275 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 MAPKAPK3Q16644 382 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 C9orf57Q5W0N0 161 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 DRICH1Q6PGQ1 229 aaPredicted RBP15.96■□□□□ 0.15
NPHP3-201ENST00000337331 STK40Q8N2I9 435 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CAMKK1Q8N5S9 505 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 RDH11Q8TC12 318 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 MFSD3Q96ES6 412 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CTRCQ99895 268 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 NTPCRQ9BSD7 190 aaKnown RBP15.96■□□□□ 0.15
NPHP3-201ENST00000337331 TMLHEQ9NVH6 421 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ATPIF1Q9UII2 106 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 LEF1Q9UJU2 399 aaPredicted RBP15.96■□□□□ 0.15
NPHP3-201ENST00000337331 DUSP12Q9UNI6 340 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 RNF11Q9Y3C5 154 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ANXA11P50995 505 aaKnown RBP15.96■□□□□ 0.15
NPHP3-201ENST00000337331 BNC1Q01954 994 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 FAM91A1Q658Y4 838 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 LBX2Q6XYB7 198 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CLYBLQ8N0X4 340 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 TRIT1Q9H3H1 467 aaKnown RBP15.96■□□□□ 0.15
NPHP3-201ENST00000337331 RIMS3Q9UJD0 308 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 PTCH2Q9Y6C5 1203 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 SMIM28A0A1B0GU29 152 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ISPDA4D126 451 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 TYMPP19971 482 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 BRCC3P46736 316 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 IRF8Q02556 426 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 PPP1R3AQ16821 1122 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 MBLAC2Q68D91 279 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 REP15Q6BDI9 236 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF773Q6PK81 442 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ACDQ96AP0 544 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 MOCOSQ96EN8 888 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 CCSER2Q9H7U1 834 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 BPIFA1Q9NP55 256 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 RAPGEFL1Q9UHV5 662 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 ST3GAL5Q9UNP4 418 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 PLIN4Q96Q06 1357 aa15.96■□□□□ 0.15
NPHP3-201ENST00000337331 AZIN1O14977 448 aa15.96■□□□□ 0.14
NPHP3-201ENST00000337331 KMOO15229 486 aa15.96■□□□□ 0.14
NPHP3-201ENST00000337331 RFPL1O75677 317 aa15.96■□□□□ 0.14
NPHP3-201ENST00000337331 OR56A5P0C7T3 313 aa15.96■□□□□ 0.14
NPHP3-201ENST00000337331 KRT20P35900 424 aa15.96■□□□□ 0.14
NPHP3-201ENST00000337331 TXNL4AP83876 142 aaKnown RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms