RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 VPS9D1Q9Y2B5 631 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 ARHGAP10A1A4S6 786 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 FAM149AA5PLN7 773 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 FAM155AB1AL88 458 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 H3BNH8 94 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 CBX4O00257 560 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 KLK8O60259 260 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 BAIAP3O94812 1187 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 GJB5O95377 273 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TSPAN12O95859 305 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 RHOCP08134 193 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 SGSHP51688 502 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 PLOD1Q02809 727 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 RCAN2Q14206 197 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 CBR4Q8N4T8 237 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TRIML2Q8N7C3 387 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 EFHBQ8N7U6 833 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 DNAJB14Q8TBM8 379 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 EEF1AKMT1Q8WVE0 214 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 ESAMQ96AP7 390 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TMEM125Q96AQ2 219 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 ZNF512Q96ME7 567 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 BPIFA1Q9NP55 256 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 AGPAT4Q9NRZ5 378 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 RAI2Q9Y5P3 530 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 THSD7BQ9C0I4 1608 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 ASPDHA6ND91 283 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TBC1D4O60343 1298 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TTPAP49638 278 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 CAP1Q01518 475 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 XKR7Q5GH72 579 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 BORAQ6PGQ7 559 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 EFL1Q7Z2Z2 1120 aaKnown RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 TSPEARQ8WU66 669 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 LINGO1Q96FE5 620 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 RMND5BQ96G75 393 aaPredicted RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 CDK5RAP1Q96SZ6 601 aaKnown RBP23.19■■□□□ 1.3
NDEL1-201ENST00000334527 ACOX2Q99424 681 aa23.19■■□□□ 1.3
NDEL1-201ENST00000334527 SNX2O60749 519 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CLDN11O75508 207 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CHRM1P11229 460 aaPredicted RBP23.18■■□□□ 1.3
NDEL1-201ENST00000334527 PSMA3P25788 255 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 OXTRP30559 389 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 HK3P52790 923 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 IL2P60568 153 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 SMARCB1Q12824 385 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ZRANB3Q5FWF4 1079 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 RABL3Q5HYI8 236 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CTSL3PQ5NE16 218 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 IFNEQ86WN2 208 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 EPHX4Q8IUS5 362 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 GRIN3AQ8TCU5 1115 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CASD1Q96PB1 797 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 PCDHB7Q9Y5E2 793 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 PDLIM1O00151 329 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 GIPC1O14908 333 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ZNF23P17027 643 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ZFP36L2P47974 494 aaKnown RBP23.18■■□□□ 1.3
NDEL1-201ENST00000334527 NAA20P61599 178 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 UFM1P61960 85 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 PTPRRQ15256 657 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 INTS11Q5TA45 600 aaKnown RBP23.18■■□□□ 1.3
NDEL1-201ENST00000334527 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
NDEL1-201ENST00000334527 TAS1R1Q7RTX1 841 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 GPSM1Q86YR5 675 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CAMK1DQ8IU85 385 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ADGRG5Q8IZF4 528 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 GOLM1Q8NBJ4 401 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 OR56A4Q8NGH8 313 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 OR2T11Q8NH01 316 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CD200R1Q8TD46 325 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 TFAP2CQ92754 450 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 HIC2Q96JB3 615 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 MYRFLQ96LU7 910 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 C1orf50Q9BV19 199 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 TTLL2Q9BWV7 592 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 RETREG1Q9H6L5 497 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 CD274Q9NZQ7 290 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 EIF2B4Q9UI10 523 aaKnown RBP23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ASB1Q9Y576 335 aa23.18■■□□□ 1.3
NDEL1-201ENST00000334527 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.17■■□□□ 1.3
NDEL1-201ENST00000334527 ILVBLA1L0T0 632 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 H3BSA7 217 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 PFDN6O15212 129 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 SLC22A3O75751 556 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 MTHFD1P11586 935 aaKnown RBP23.17■■□□□ 1.3
NDEL1-201ENST00000334527 FASP25445 335 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 GSK3BP49841 420 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 ZNF177Q13360 481 aaPredicted RBP23.17■■□□□ 1.3
NDEL1-201ENST00000334527 SPATS1Q496A3 300 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 PAGE3Q5JUK9 113 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 PACRGLQ8N7B6 248 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 FAM47BQ8NA70 645 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 ALG2Q9H553 416 aa23.17■■□□□ 1.3
NDEL1-201ENST00000334527 CCDC154A6NI56 674 aa23.16■■□□□ 1.3
NDEL1-201ENST00000334527 ANKRD66B4E2M5 251 aa23.16■■□□□ 1.3
NDEL1-201ENST00000334527 H7C4K7 107 aa23.16■■□□□ 1.3
NDEL1-201ENST00000334527 COL6A1P12109 1028 aa23.16■■□□□ 1.3
NDEL1-201ENST00000334527 CASP2P42575 452 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms