RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 C12orf66Q96MD2 445 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TSSK3Q96PN8 268 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 LGMNQ99538 433 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM39BQ9GZU3 492 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 MIR1-1HGQ9H1L0 117 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SMPD4Q9NXE4 827 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ATPIF1Q9UII2 106 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FRMPD4Q14CM0 1322 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ACOX3O15254 700 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CLPXO76031 633 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CDH5P33151 784 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF135P52742 658 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 DCST1Q5T197 706 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CLEC6AQ6EIG7 209 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CENPSQ8N2Z9 138 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 RASGEF1CQ8N431 466 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF248Q8NDW4 579 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 FCGR1BQ92637 280 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CRELD1Q96HD1 420 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ATG10Q9H0Y0 220 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SCN2BO60939 215 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 KRT33AO76009 404 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 GOT1P17174 413 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NOS2P35228 1153 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 AFF1P51825 1210 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SLC18A2Q05940 514 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MAB21L1Q13394 359 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PITRM1Q5JRX3 1037 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ANO7Q6IWH7 933 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CYP4V2Q6ZWL3 525 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 GHDCQ8N2G8 530 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PGLYRP2Q96PD5 576 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TMPRSS4Q9NRS4 437 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PLK2Q9NYY3 685 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NKX1-2Q9UD57 310 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ARHGEF5Q12774 1597 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 KPNA3O00505 521 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CCNB2O95067 398 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 POMCP01189 267 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CDH12P55289 794 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CDH15P55291 814 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TSPAN5P62079 268 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PPM1JQ5JR12 505 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TPRG1LQ5T0D9 272 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TAPT1Q6NXT6 567 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PIGWQ7Z7B1 504 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 DEFB132Q7Z7B7 95 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ZFAND2BQ8WV99 257 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SMG7Q92540 1137 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM39AQ9NV64 488 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 FBXO5Q9UKT4 447 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PCDHGC3Q9UN70 934 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PSMD9O00233 223 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MERTKQ12866 999 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NFIXQ14938 502 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM53Q6P2H8 277 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 ZYG11AQ6WRX3 759 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 BBS12Q6ZW61 710 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CYP4X1Q8N118 509 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NETO2Q8NC67 525 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NKD1Q969G9 470 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 GAL3ST1Q99999 423 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MCMBPQ9BTE3 642 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SEC14L3Q9UDX4 400 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MEMO1Q9Y316 297 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 VWA7Q9Y334 891 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PPEF2O14830 753 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 PIRTP0C851 137 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 RARRES1P49788 294 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 NRG3P56975 720 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MTA1Q13330 715 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 RBM48Q5RL73 367 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 FBXO16Q8IX29 292 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SRFBP1Q8NEF9 429 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 KAT2AQ92830 837 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 MSANTD3Q96H12 275 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM169Q96HH4 297 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 OSMRQ99650 979 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 LPIN3Q9BQK8 851 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TRIM2Q9C040 744 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TBCCD1Q9NVR7 557 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 TIMM22Q9Y584 194 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SAGP10523 405 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SERPINA4P29622 427 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 EIF5AP63241 154 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 RHEBQ15382 184 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 CMTR2Q8IYT2 770 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 HJURPQ8NCD3 748 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 GATAD2BQ8WXI9 593 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 LENG9Q96B70 501 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 LRTM1Q9HBL6 345 aa9.74□□□□□ -0.85
COL4A6-201ENST00000334504 SUCOQ9UBS9 1254 aaKnown RBP9.74□□□□□ -0.85
COL4A6-201ENST00000334504 C9IYK1 514 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 AGPSO00116 658 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms