RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 LMLNQ96KR4 655 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 C12orf65Q9H3J6 166 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 WDR26Q9H7D7 661 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 VPS4AQ9UN37 437 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 GON4LQ3T8J9 2241 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 PSMA3P25788 255 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CMPK1P30085 196 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 MTHFRP42898 656 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 BIKQ13323 160 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 ACAP2Q15057 778 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CYP1B1Q16678 543 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 AP1ARQ63HQ0 302 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 ZFP1Q6P2D0 407 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 BRAT1Q6PJG6 821 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 TMCO2Q7Z6W1 182 aaPredicted RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 SRFBP1Q8NEF9 429 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 OR10T2Q8NGX3 314 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 TCHHQ07283 1943 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 OR51F1A6NGY5 319 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 GABRDO14764 452 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 TEX28O15482 410 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 SLC22A3O75751 556 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CLDN9O95484 217 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CCNYL2Q5T2Q4 361 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 RP9Q8TA86 221 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF514Q96K75 400 aaPredicted RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 C12orf66Q96MD2 445 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM79Q9BSE2 394 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 FBXL12Q9NXK8 326 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 GPN3Q9UHW5 284 aaPredicted RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 ANGPT4Q9Y264 503 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 COCHO43405 550 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GJB5O95377 273 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GNSP15586 552 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GRIA1P42261 906 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF460Q14592 562 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SLC1A5Q15758 541 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GSTA3Q16772 222 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 DPP10Q8N608 796 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 MCMBPQ9BTE3 642 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 RIOK2Q9BVS4 552 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 LRTM1Q9HBL6 345 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ENOPH1Q9UHY7 261 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 HOXB2P14652 356 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GRIA3P42263 894 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SLC1A2P43004 574 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 MRPS35P82673 323 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SLC25A11Q02978 314 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CHIT1Q13231 466 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 GPR33Q49SQ1 333 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 RTP2Q5QGT7 225 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 C9orf64Q5T6V5 341 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 LYSMD3Q7Z3D4 306 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF276Q8N554 614 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 MRPL48Q96GC5 212 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 BORCS6Q96GS4 357 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SPATA5L1Q9BVQ7 753 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CARS2Q9HA77 564 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 EDDM13A0A1B0GTR0 161 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 TRBC1P01850 177 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CFIP05156 583 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 NCF4Q15080 339 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 MYLK3Q32MK0 819 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ATP13A5Q4VNC0 1218 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ANXA8L1Q5VT79 327 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 TRIM40Q6P9F5 258 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ENPP7Q6UWV6 458 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 PLEKHM3Q6ZWE6 761 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 BHLHE22Q8NFJ8 381 aaPredicted RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 RCN3Q96D15 328 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SPAG4Q9NPE6 437 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 COL16A1Q07092 1604 aaPredicted RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 SERPINA6P08185 405 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ZCCHC18P0CG32 403 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CLK3P49761 638 aaKnown RBP14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CLCQ05315 142 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 STX4Q12846 297 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CPTPQ5TA50 214 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 DCAF4L2Q8NA75 395 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 ITCHQ96J02 903 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 RIBC2Q9H4K1 309 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 CD248Q9HCU0 757 aa14.89□□□□□ -0.03
C9orf47-201ENST00000334490 TK2O00142 265 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 CLOCKO15516 846 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 HSMCR30P0CW71 290 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 NDUFA9Q16795 377 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ITPRIPL2Q3MIP1 535 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ARL13AQ5H913 290 aaPredicted RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 RNF43Q68DV7 783 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 IRGCQ6NXR0 463 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ZC3H3Q8IXZ2 948 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 LMO3Q8TAP4 145 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ESAMQ96AP7 390 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms