RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PYROXD2Q8N2H3 581 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CSNK2A3Q8NEV1 391 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PEX13Q92968 403 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DIRAS2Q96HU8 199 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BTBD10Q9BSF8 475 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SMURF1Q9HCE7 757 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CENPMQ9NSP4 180 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 WHRNQ9P202 907 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KIAA1257Q9ULG3 409 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 VPS9D1Q9Y2B5 631 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF213O14771 459 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 RHOP08100 348 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GCSHP23434 173 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHATP28329 748 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRNB4P30926 498 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 E2F2Q14209 437 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FCN2Q15485 313 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM171A1Q5VUB5 890 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCNT2Q6UVM3 1135 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FASTKD5Q7L8L6 764 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 MMAAQ8IVH4 418 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR13C2Q8NGS9 318 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 RIN2Q8WYP3 895 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 MMTAG2Q9BU76 263 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF436Q9C0F3 470 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM206Q9H813 350 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SCUBE2Q9NQ36 999 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM206AQ9NX38 181 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GDAP2Q9NXN4 497 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 EIF3KQ9UBQ5 218 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PHTF1Q9UMS5 762 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TBC1D30Q9Y2I9 924 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 LMTK2Q8IWU2 1503 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 POLR1AO95602 1720 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SH3PXD2BA1X283 911 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 B2RBV5 119 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PDXKO00764 312 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 AKR7A3O95154 331 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KITP10721 976 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NNMTP40261 264 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CD97P48960 835 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDK7P50613 346 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 IDH3GP51553 393 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CACNB2Q08289 660 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PDK3Q15120 406 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPAT3Q53EU6 434 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 UGT3A1Q6NUS8 523 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCNIP4Q6PIL6 250 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 IQCKQ8N0W5 287 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC43A3Q8NBI5 491 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NSMAFQ92636 917 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM131CQ96AQ9 280 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BCL7BQ9BQE9 202 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZBTB3Q9H5J0 574 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CATSPERBQ9H7T0 1116 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZDHHC11Q9H8X9 412 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 HEBP1Q9NRV9 189 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZMYM4Q5VZL5 1548 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 IQCMA0A1B0GVH7 501 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DPYSL4O14531 572 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRNGP07510 517 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ITGA2BP08514 1039 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 JUNDP17535 347 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 XRCC1P18887 633 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAPK7Q13164 816 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPP2R2DQ66LE6 453 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 WDR53Q7Z5U6 358 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRAMD2AQ8IUY3 354 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAPK15Q8TD08 544 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BRI3BPQ8WY22 251 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DENND2DQ9H6A0 471 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CD320Q9NPF0 282 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PIH1D1Q9NWS0 290 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRNA9Q9UGM1 479 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 C13orf42A0A1B0GVH6 325 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FABP1P07148 127 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 UCHL3P15374 230 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TBXAS1P24557 533 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GKP32189 559 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDK3Q00526 305 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 AHSA2Q719I0 299 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF444Q8N0Y2 327 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 TTLL6Q8N841 843 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NODALQ96S42 347 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 IL17RBQ9NRM6 502 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FBXW2Q9UKT8 454 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARID1AO14497 2285 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC31A1O15431 190 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KDELR3O43731 214 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 VPS4BO75351 444 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GADD45AP24522 165 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC9A3R2Q15599 337 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SF1Q15637 639 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BCL2A1Q16548 175 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms