RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SLC9A4Q6AI14 798 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 PQLC3Q8N755 202 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 DNAJB14Q8TBM8 379 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 SLC7A6OSQ96CW6 309 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 CLPBQ9H078 707 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 RERGLQ9H628 205 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 POLMQ9NP87 494 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-201ENST00000334136 ELOVL2Q9NXB9 296 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 VTI1BQ9UEU0 232 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 LNPEPQ9UIQ6 1025 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 MFHAS1Q9Y4C4 1052 aa11.73□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3DA0A087WVF3 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3IA0A087WXS9 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3EA0A087X179 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3KA0A087X1G2 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3FA6NER0 549 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3LB9A6J9 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 C2P06681 752 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 DLDP09622 509 aaKnown RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3HP0C7X1 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 GPX6P59796 221 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 NAA20P61599 178 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 CTBP1Q13363 440 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 PCID2Q5JVF3 399 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3GQ6DHY5 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3CQ6IPX1 549 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SPRED2Q7Z698 418 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 NPAS3Q8IXF0 933 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TBC1D3Q8IZP1 549 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 DSELQ8IZU8 1212 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SLC35B2Q8TB61 432 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 KCTD14Q9BQ13 255 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 ROGDIQ9GZN7 287 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 ZSCAN9O15535 394 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 NDST3O95803 873 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 MZF1P28698 734 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 IL5RAQ01344 420 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 DMPKQ09013 629 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 LMAN2Q12907 356 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SETMARQ53H47 684 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 HTR3DQ70Z44 454 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SLC41A1Q8IVJ1 513 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 ZDHHC14Q8IZN3 488 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SNX31Q8N9S9 440 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 AZIN2Q96A70 460 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 CCDC126Q96EE4 140 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SLC25A23Q9BV35 468 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SLC2A11Q9BYW1 496 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 MID1IP1Q9NPA3 183 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SYBUQ9NX95 663 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 XPR1Q9UBH6 696 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TRIP11Q15643 1979 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 A0A1W2PQ67 120 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 CRHR1P34998 444 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 CARD16Q5EG05 197 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 SPANXN3Q5MJ09 141 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 LILRA6Q6PI73 481 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 LIMS2Q7Z4I7 341 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 UNC5BQ8IZJ1 945 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 NSMCE2Q96MF7 247 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 FEM1AQ9BSK4 669 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 GBA3Q9H227 469 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 NOL6Q9H6R4 1146 aaKnown RBP11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TMEM216Q9P0N5 145 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
HDAC6-201ENST00000334136 TULP3O75386 442 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 GCATO75600 419 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 KAT7O95251 611 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 OAS1P00973 400 aaKnown RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 MT-ND1P03886 318 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 FYNP06241 537 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 F7P08709 466 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 SLC7A2P52569 658 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 GALNT2Q10471 571 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 Q6ZVU0 165 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 PANX3Q96QZ0 392 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 VPS51Q9UID3 782 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 RNF112Q9ULX5 631 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 CRYL1Q9Y2S2 319 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 PIAS3Q9Y6X2 628 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 ANKRD12Q6UB98 2062 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 FAM149AA5PLN7 773 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 LINC01565O15544 149 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 CCDC159P0C7I6 412 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 PCNAP12004 261 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 TSHRP16473 764 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 RGS4P49798 205 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 SERINC3Q13530 473 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms