RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ITIH1P19827 911 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 CAPN3P20807 821 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 KPNA2P52292 529 aaKnown RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 VBP1P61758 197 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 AASDHQ4L235 1098 aaPredicted RBP18.04■□□□□ 0.48
PKP3-201ENST00000331563 PAGE2Q7Z2X7 111 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 GPR78Q96P69 363 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 LPIN3Q9BQK8 851 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 CYP3A43Q9HB55 503 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 KLK14Q9P0G3 267 aa18.04■□□□□ 0.48
PKP3-201ENST00000331563 ARHGAP33O14559 1287 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 RFPL2O75678 378 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 SUPT7LO94864 414 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 ALDOCP09972 364 aaKnown RBP18.03■□□□□ 0.48
PKP3-201ENST00000331563 GPX3P22352 226 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 BDNFP23560 247 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 SCN1AP35498 2009 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 GSK3BP49841 420 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 FPGSQ05932 587 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 CDC20Q12834 499 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
PKP3-201ENST00000331563 SLC51BQ86UW2 128 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 RASSF5Q8WWW0 418 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
PKP3-201ENST00000331563 VPS33AQ96AX1 596 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 C19orf60Q96EN9 201 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 KIF12Q96FN5 646 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 TANC1Q9C0D5 1861 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 C12orf10Q9HB07 376 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 CASS4Q9NQ75 786 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 PCDHB3Q9Y5E6 796 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 ZBTB24O43167 697 aaPredicted RBP18.03■□□□□ 0.48
PKP3-201ENST00000331563 HCRTO43612 131 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 MYL3P08590 195 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 HOXA11P31270 313 aaPredicted RBP18.03■□□□□ 0.48
PKP3-201ENST00000331563 FKBP1BP68106 108 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 NFYCQ13952 458 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 UGP2Q16851 508 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 CCDC103Q8IW40 242 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 LGI2Q8N0V4 545 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 MIER2Q8N344 545 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 MINDY1Q8N5J2 469 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 RNF139Q8WU17 664 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 NODALQ96S42 347 aa18.03■□□□□ 0.48
PKP3-201ENST00000331563 IPO13O94829 963 aaKnown RBP18.02■□□□□ 0.48
PKP3-201ENST00000331563 TAS2R39P59534 338 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 LIPEQ05469 1076 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 VAC14Q08AM6 782 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 MAP2K5Q13163 448 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 C6orf141Q5SZD1 244 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 GIPC2Q8TF65 315 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 C18orf25Q96B23 403 aaPredicted RBP18.02■□□□□ 0.48
PKP3-201ENST00000331563 FAM149B1Q96BN6 582 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 C3orf30Q96M34 536 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 IRF2BPLQ9H1B7 796 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 AKTIPQ9H8T0 292 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 DSEQ9UL01 958 aa18.02■□□□□ 0.48
PKP3-201ENST00000331563 RAD51BO15315 384 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 PTPN3P26045 913 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 CTGFP29279 349 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 NPY2RP49146 381 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 ALDH3A2P51648 485 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 PYCR3Q53H96 274 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 LARP4Q71RC2 724 aaKnown RBP eCLIP18.02■□□□□ 0.473e-8■■■□□ 15.6
PKP3-201ENST00000331563 RASAL3Q86YV0 1011 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 ZNF555Q8NEP9 628 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 MUL1Q969V5 352 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 RMDN1Q96DB5 314 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 C2orf49Q9BVC5 232 aaPredicted RBP18.02■□□□□ 0.47
PKP3-201ENST00000331563 TOR3AQ9H497 397 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 RUBCNLQ9H714 662 aa18.02■□□□□ 0.47
PKP3-201ENST00000331563 ZFC3H1O60293 1989 aaKnown RBP18.02■□□□□ 0.47
PKP3-201ENST00000331563 A8MT66 165 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 H0Y858 1186 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 AGXTP21549 392 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 SNX16P57768 344 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 DNAJB13P59910 316 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 C19orf57Q0VDD7 668 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 HSPA14Q0VDF9 509 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 EIF2B5Q13144 721 aaKnown RBP18.01■□□□□ 0.47
PKP3-201ENST00000331563 DAG1Q14118 895 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 DGCR6Q14129 220 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 SOWAHAQ2M3V2 549 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 OR6Q1Q8NGQ2 317 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 HDAC2Q92769 488 aaKnown RBP18.01■□□□□ 0.47
PKP3-201ENST00000331563 MIR1-1HGQ9H1L0 117 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 NXF3Q9H4D5 531 aaKnown RBP18.01■□□□□ 0.47
PKP3-201ENST00000331563 TLR9Q9NR96 1032 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 KCNN3Q9UGI6 736 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 PTGDR2Q9Y5Y4 395 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 AXIN1O15169 862 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 DAB1O75553 588 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 MFN2O95140 757 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 HTR1AP08908 422 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 CES1P23141 567 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 CD40LGP29965 261 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 APLP1P51693 650 aa18.01■□□□□ 0.47
PKP3-201ENST00000331563 GP2P55259 537 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms