RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 RGMBQ6NW40 437 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 LINC00518Q8N0U6 118 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 GON7Q9BXV9 100 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 DDIT4Q9NX09 232 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 PCDHGA10Q9Y5H3 936 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 ZBTB14O43829 449 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 RNGTTO60942 597 aaKnown RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 OR7A10O76100 309 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 HSPA4LO95757 839 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 C2P06681 752 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 HOXB1P14653 301 aaPredicted RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 SAT1P21673 171 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 AXLP30530 894 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 CYP2C18P33260 490 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 CLK1P49759 484 aaKnown RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 SEMA3BQ13214 749 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 C17orf99Q6UX52 265 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 HID1Q8IV36 788 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 FLCNQ8NFG4 579 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 BPIFB6Q8NFQ5 453 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 SNX19Q92543 992 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 SMOQ99835 787 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 CASS4Q9NQ75 786 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 IARS2Q9NSE4 1012 aaKnown RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 C20orf96Q9NUD7 363 aaPredicted RBP17.03■□□□□ 0.32
PRKCD-201ENST00000330452 PCDH10Q9P2E7 1040 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 TNFRSF10DQ9UBN6 386 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
PRKCD-201ENST00000330452 MYBPHLA2RUH7 354 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 RAD51BO15315 384 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 CPNE6O95741 557 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 ELNP15502 786 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 MYF6P23409 242 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 ETV1P50549 477 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 DAOAP59103 153 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 ZNF33BQ06732 778 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 AQP6Q13520 282 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.32
PRKCD-201ENST00000330452 PAN2Q504Q3 1202 aaKnown RBP17.02■□□□□ 0.32
PRKCD-201ENST00000330452 KCTD11Q693B1 232 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 URGCPQ8TCY9 931 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 MARC2Q969Z3 335 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 HDAC11Q96DB2 347 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 CELF6Q96J87 481 aaKnown RBP17.02■□□□□ 0.32
PRKCD-201ENST00000330452 RHOBTB2Q9BYZ6 727 aa17.02■□□□□ 0.32
PRKCD-201ENST00000330452 PAQR5Q9NXK6 330 aaPredicted RBP17.02■□□□□ 0.32
PRKCD-201ENST00000330452 CENPXA8MT69 81 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 FAM25AB3EWG3 89 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 FAM25CB3EWG5 89 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 FAM25GB3EWG6 89 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 PI15O43692 258 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 SEMA3DO95025 777 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 DLGAP3O95886 979 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 SPNP16150 400 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 CCR10P46092 362 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 PDCD11Q14690 1871 aaKnown RBP17.02■□□□□ 0.31
PRKCD-201ENST00000330452 ZFP69Q49AA0 526 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 Q5BKY6 102 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 KCNMB4Q86W47 210 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 LRTOMTQ8WZ04 291 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 ATP6V1E2Q96A05 226 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 ISL2Q96A47 359 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 CEP19Q96LK0 163 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 RTKNQ9BST9 563 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 FBXW11Q9UKB1 542 aa17.02■□□□□ 0.31
PRKCD-201ENST00000330452 GABRDO14764 452 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 SEC14L2O76054 403 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 NMBRP28336 390 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 PTPN5P54829 565 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 YIF1BQ5BJH7 314 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 PIGGQ5H8A4 983 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 MTX3Q5HYI7 312 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 CHST15Q7LFX5 561 aaPredicted RBP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 GATAD2AQ86YP4 633 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 GALNT11Q8NCW6 608 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 SENP8Q96LD8 212 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 CDRT15Q96T59 188 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 AP5M1Q9H0R1 490 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 DIABLOQ9NR28 239 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 IPO11Q9UI26 975 aaKnown RBP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 ADAM28Q9UKQ2 775 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 CDH23Q9H251 3354 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 JCHAINP01591 159 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 GSNP06396 782 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 CHRNGP07510 517 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 POLR2IP36954 125 aaKnown RBP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 PCBP1Q15365 356 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 PDZD4Q76G19 769 aaPredicted RBP17.01■□□□□ 0.31
PRKCD-201ENST00000330452 LACC1Q8IV20 430 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 PCED1BQ96HM7 432 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 OR52B2Q96RD2 323 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 NMRAL1Q9HBL8 299 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 SMOXQ9NWM0 555 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 SLC39A10Q9ULF5 831 aa17.01■□□□□ 0.31
PRKCD-201ENST00000330452 LINC01387J3KSC0 135 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms