RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 TGIF1Q15583 401 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 PPP2R5EQ16537 467 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 PCSK7Q16549 785 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 KDELC1Q6UW63 502 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ARHGAP22Q7Z5H3 698 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 RCOR2Q8IZ40 523 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 RCBTB1Q8NDN9 531 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 P3H4Q92791 437 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 MED8Q96G25 268 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 AHCYL2Q96HN2 611 aaKnown RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 RBM41Q96IZ5 413 aaKnown RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 TEFMQ96QE5 360 aaKnown RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 FCRL5Q96RD9 977 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ASPSCR1Q9BZE9 553 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 GPR63Q9BZJ6 419 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 HACD3Q9P035 362 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 SHOC2Q9UQ13 582 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 KCNK6Q9Y257 313 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 HYOU1Q9Y4L1 999 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 BSNQ9UPA5 3926 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 KMOO15229 486 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 PECAM1P16284 738 aaPredicted RBP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 BPIP17213 487 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 FECHP22830 423 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 COPS2P61201 443 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 UBE2IP63279 158 aaKnown RBP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 XRCC4Q13426 336 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 WASH2PQ6VEQ5 465 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 LRRTM4Q86VH4 590 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 BMPERQ8N8U9 685 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 BRSK1Q8TDC3 778 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 ZPBPQ9BS86 351 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 OR2AG1Q9H205 316 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 WASH6PQ9NQA3 447 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 TMEM9Q9P0T7 183 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 CPNE7Q9UBL6 633 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 EFR3BQ9Y2G0 817 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 PCDHA13Q9Y5I0 950 aa13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
GTF3C6-201ENST00000329970 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 SPTA1P02549 2419 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 APOC4-APOC2K7ER74 178 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 KCNJ13O60928 360 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 PMPCBO75439 489 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 APOC2P02655 101 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ANKRD34CP0C6C1 535 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 PIRTP0C851 137 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ZNF7P17097 686 aaPredicted RBP13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 NFKB1P19838 968 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 CYLC1P35663 651 aaPredicted RBP13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 WNT3AP56704 352 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ADCY2Q08462 1091 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 MPP3Q13368 585 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ALS2CLQ60I27 953 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ABRAXAS1Q6UWZ7 409 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 KDELC2Q7Z4H8 507 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ZNF605Q86T29 641 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 RBM12BQ8IXT5 1001 aaKnown RBP13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 ZSCAN1Q8NBB4 408 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 NKD1Q969G9 470 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 MRGPRX2Q96LB1 330 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 KLC4Q9NSK0 619 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 TRHDEQ9UKU6 1024 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 SPO11Q9Y5K1 396 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
GTF3C6-201ENST00000329970 TRBV23OR9-2A0A075B6M9 112 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 BTNL10A8MVZ5 291 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 AURKAO14965 403 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 C9P02748 559 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 TNNT1P13805 278 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 PTPN7P35236 360 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 MC2RQ01718 297 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 SPA17Q15506 151 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 SLC1A5Q15758 541 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 DCAF12Q5T6F0 453 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 AGAP9Q5VTM2 703 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 KAZNQ674X7 775 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 C11orf96Q7Z7L8 435 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 ZNF761Q86XN6 746 aaPredicted RBP13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 PLXDC1Q8IUK5 500 aa13.38□□□□□ -0.27
GTF3C6-201ENST00000329970 ZNF547Q8IVP9 402 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms