RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 GPRC5AQ8NFJ5 357 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 OR10H4Q8NGA5 316 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 PIWIL1Q96J94 861 aaKnown RBP16.35■□□□□ 0.21
SMAD3-201ENST00000327367 NCKAP1Q9Y2A7 1128 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 GPR75-ASB3A0A0A6YYF3 556 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SMCO3A2RU48 225 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SLC35F4A4IF30 521 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 TLX1P31314 330 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-201ENST00000327367 DNASE1L1P49184 302 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 MTPNP58546 118 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SP140Q13342 867 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 ARL13AQ5H913 290 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SLC30A6Q6NXT4 461 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 KCNC2Q96PR1 638 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SEMA3CQ99985 751 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 EBF4Q9BQW3 602 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 ZCCHC2Q9C0B9 1178 aaKnown RBP16.35■□□□□ 0.21
SMAD3-201ENST00000327367 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
SMAD3-201ENST00000327367 SGK2Q9HBY8 427 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 PPM1HQ9ULR3 514 aa16.35■□□□□ 0.21
SMAD3-201ENST00000327367 TGDSO95455 350 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 ASLP04424 464 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 C2P06681 752 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 PGM5Q15124 567 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 MPPE1Q53F39 396 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 GPR158Q5T848 1215 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 PYHIN1Q6K0P9 492 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 XRRA1Q6P2D8 792 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 SLITRK4Q8IW52 837 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 HJURPQ8NCD3 748 aaPredicted RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 CEP76Q8TAP6 659 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 WNT8BQ93098 351 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 AZIN2Q96A70 460 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 POLR3BQ9NW08 1133 aaPredicted RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 MSL3P1P0C860 447 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 MC4RP32245 332 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 GNALP38405 381 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 GTF2A2P52657 109 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 FBXO5Q9UKT4 447 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 HSPB11Q9Y547 144 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 BTNL10A8MVZ5 291 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 GARNL3Q5VVW2 1013 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 CCDC28AQ8IWP9 274 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 UBR7Q8N806 425 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 XAGE5Q8WWM1 108 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 TVP23BQ9NYZ1 205 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 TSHRP16473 764 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 HAGHLQ6PII5 290 aaPredicted RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 ZNF627Q7L945 461 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 OR4L1Q8NH43 312 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 FAM151AQ8WW52 585 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.217e-6■■□□□ 13
SMAD3-201ENST00000327367 VWA7Q9Y334 891 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 H3BSH0 61 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 FSCN2O14926 492 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 AXIN1O15169 862 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 IPO13O94829 963 aaKnown RBP16.34■□□□□ 0.21
SMAD3-201ENST00000327367 TTPAP49638 278 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 IL17AQ16552 155 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 IL23RQ5VWK5 629 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 OR5J2Q8NH18 312 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 OSER1Q9NX31 292 aa16.34■□□□□ 0.21
SMAD3-201ENST00000327367 TBX10O75333 385 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 CABYRO75952 493 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 CKMT2P17540 419 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 POLR2EP19388 210 aaKnown RBP16.33■□□□□ 0.21
SMAD3-201ENST00000327367 MPP1Q00013 466 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 GANABQ14697 944 aaKnown RBP16.33■□□□□ 0.21
SMAD3-201ENST00000327367 UFD1Q92890 307 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 AHCYL2Q96HN2 611 aaKnown RBP16.33■□□□□ 0.21
SMAD3-201ENST00000327367 MAGI3Q5TCQ9 1506 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 SLC25A27O95847 323 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 FAM76BQ5HYJ3 339 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 DCST1Q5T197 706 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 ANKRD22Q5VYY1 191 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.21
SMAD3-201ENST00000327367 ZNF717Q9BY31 904 aaPredicted RBP16.33■□□□□ 0.21
SMAD3-201ENST00000327367 EFCAB6Q5THR3 1501 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 NFIAQ12857 509 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 TPRG1LQ5T0D9 272 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 HECTD2Q5U5R9 776 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 FAM171A1Q5VUB5 890 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 TMEM236Q5W0B7 351 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 ZNF782Q6ZMW2 699 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-201ENST00000327367 OTOP3Q7RTS5 596 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 ZNF563Q8TA94 476 aa16.33■□□□□ 0.2
SMAD3-201ENST00000327367 MGME1Q9BQP7 344 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms