RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ADCY8P40145 1251 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 POLD2P49005 469 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 ITGA1P56199 1179 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 RALGDSQ12967 914 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 CYTH1Q15438 398 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 TESK1Q15569 626 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 UGT8Q16880 541 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 THAP4Q8WY91 577 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 CCDC42Q96M95 316 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 PACSIN1Q9BY11 444 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 FRMD8Q9BZ67 464 aaPredicted RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 SUV39H2Q9H5I1 410 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 LHX3Q9UBR4 397 aa13.07□□□□□ -0.32
SYCN-201ENST00000318438 ANKHD1Q8IWZ3 2542 aaKnown RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 DIDO1Q9BTC0 2240 aaKnown RBP13.07□□□□□ -0.32
SYCN-201ENST00000318438 AKR1B15C9JRZ8 316 aaPredicted RBP13.06□□□□□ -0.32
SYCN-201ENST00000318438 J3KR12 359 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 PROSCO94903 275 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 CCNYL3P0C7X3 344 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
SYCN-201ENST00000318438 FASLGP48023 281 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 SH3BP2P78314 561 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 NFATC2Q13469 925 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 IL10RAQ13651 578 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 GRM3Q14832 879 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 HADHQ16836 314 aaKnown RBP13.06□□□□□ -0.32
SYCN-201ENST00000318438 PLEKHN1Q494U1 663 aaPredicted RBP13.06□□□□□ -0.32
SYCN-201ENST00000318438 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 TXNRD3NBQ6F5E7 133 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 LIPIQ6XZB0 460 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 GDF7Q7Z4P5 450 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 IQCKQ8N0W5 287 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 FDCSPQ8NFU4 85 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 FAM71BQ8TC56 605 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
SYCN-201ENST00000318438 CSPG4P5Q96PW8 444 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 OR6C1Q96RD1 312 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 CHP1Q99653 195 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 SP110Q9HB58 689 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 PADI1Q9ULC6 663 aa13.06□□□□□ -0.32
SYCN-201ENST00000318438 SVILO95425 2214 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 POLEQ07864 2286 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 HEATR9A2RTY3 570 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 A8MX80 341 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 DFFAO00273 331 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 CEACAM4O75871 244 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 EML2O95834 649 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 SERPINB6P35237 376 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 PTGIRP43119 386 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 IL10RBQ08334 325 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 RFTN1Q14699 578 aaPredicted RBP13.05□□□□□ -0.32
SYCN-201ENST00000318438 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.05□□□□□ -0.32
SYCN-201ENST00000318438 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 MMP21Q8N119 569 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 SFRP1Q8N474 314 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 AKIRIN1Q9H9L7 192 aaPredicted RBP13.05□□□□□ -0.32
SYCN-201ENST00000318438 LHX9Q9NQ69 397 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 PHPT1Q9NRX4 125 aaPredicted RBP13.05□□□□□ -0.32
SYCN-201ENST00000318438 SPTLC3Q9NUV7 552 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
SYCN-201ENST00000318438 A6NL46 340 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 C21orf140B9A014 251 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 PALMO75781 387 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 HOXB4P17483 251 aaPredicted RBP13.04□□□□□ -0.32
SYCN-201ENST00000318438 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
SYCN-201ENST00000318438 SEPHS1P49903 392 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 CDH6P55285 790 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 GFERP55789 205 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 PER3P56645 1201 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 HHEXQ03014 270 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 PEX6Q13608 980 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 KRT81Q14533 505 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 ACOX1Q15067 660 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
SYCN-201ENST00000318438 DOK6Q6PKX4 331 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 SPNS3Q6ZMD2 512 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 ARHGAP36Q6ZRI8 547 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 RHOT2Q8IXI1 618 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 NSMCE3Q96MG7 304 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 ZNF599Q96NL3 588 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
SYCN-201ENST00000318438 ZNF670Q9BS34 389 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms