RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CYP4B1P13584 511 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 JUNBP17275 347 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ITGB6P18564 788 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 PRDX3P30048 256 aaKnown RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 CA8P35219 290 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 HERVK_113P63132 956 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 TUBA3CQ13748 450 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 PTPRCAPQ14761 206 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ATAD3BQ5T9A4 648 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 UNC93AQ86WB7 457 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 B3GALNT2Q8NCR0 500 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 BEST2Q8NFU1 509 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 RHNO1Q9BSD3 238 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ERVK-6Q9BXR3 956 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 YTHDF1Q9BYJ9 559 aaKnown RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 SDR39U1Q9NRG7 319 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 FAM118AQ9NWS6 357 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 MARCH4Q9P2E8 410 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 AAR2Q9Y312 384 aaKnown RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 KCTD3Q9Y597 815 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 TIMM13Q9Y5L4 95 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 TANC1Q9C0D5 1861 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 UPK1AO00322 258 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 C7P10643 843 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 FMO3P31513 532 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 CCNA1P78396 465 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 IL5RAQ01344 420 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 UGT3A1Q6NUS8 523 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ENPP6Q6UWR7 440 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 KIAA0408Q6ZU52 694 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 VASH1Q7L8A9 365 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 GALNT5Q7Z7M9 940 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 OSTM1Q86WC4 334 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 HEATR4Q86WZ0 1026 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 DTWD1Q8N5C7 304 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ZNF555Q8NEP9 628 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 FRS2Q8WU20 508 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ZNF641Q96N77 438 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 RBM22Q9NW64 420 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 ANKMY1Q9P2S6 941 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 TSR3Q9UJK0 312 aaKnown RBP9.59□□□□□ -0.87
PTPRA-202ENST00000318266 A0A1W2PP18 115 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 AGRPO00253 132 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TBX1O43435 398 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SNX2O60749 519 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 RECQL4O94761 1208 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SEC24AO95486 1093 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 UGT2B4P06133 528 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 NPR3P17342 541 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ARSDP51689 593 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 AASDHQ4L235 1098 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 IRAK1BP1Q5VVH5 260 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TXNDC11Q6PKC3 985 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 GADL1Q6ZQY3 521 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 PLPPR4Q7Z2D5 763 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CNDP2Q96KP4 475 aaKnown RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CTRCQ99895 268 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 FEM1AQ9BSK4 669 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 HGH1Q9BTY7 390 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 COLEC11Q9BWP8 271 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TRIM54Q9BYV2 358 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CARS2Q9HA77 564 aaKnown RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 GLOD4Q9HC38 313 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 NDFIP2Q9NV92 336 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 FBXW11Q9UKB1 542 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 PMF1-BGLAPU3KQ54 211 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF646O15015 1829 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SUPT3HB4E1H0 165 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SOAT2O75908 522 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CST1P01037 141 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CYBBP04839 570 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 HLA-DQB2P05538 268 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ALOX5P09917 674 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TGFB3P10600 412 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ATP4BP51164 291 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 EMX1Q04741 257 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CHRNB3Q05901 458 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ARL13BQ3SXY8 428 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 DLK2Q6UY11 383 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 AKAP14Q86UN6 197 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 PHYKPLQ8IUZ5 450 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 MFSD4AQ8N468 514 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 POC5Q8NA72 575 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CHST13Q8NET6 341 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 NT5C3BQ969T7 300 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 MUL1Q969V5 352 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 UBXN10Q96LJ8 280 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 PSD2Q9BQI7 771 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TP63Q9H3D4 680 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 HACD3Q9P035 362 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms