RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 BLOC1S5Q8TDH9 187 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 HDAC10Q969S8 669 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TBATAQ96M53 351 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 LRGUKQ96M69 825 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 CTRCQ99895 268 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 ATAD3AQ9NVI7 634 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 QPCTLQ9NXS2 382 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 INTS6Q9UL03 887 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 DOLKQ9UPQ8 538 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 POMPQ9Y244 141 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 FCF1Q9Y324 198 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TIMM22Q9Y584 194 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 PCDHGC4Q9Y5F7 938 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 FAM95CA0A1B0GW59 222 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SNNO75324 88 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 MPOP05164 745 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SBK3P0C264 359 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 PAMP19021 973 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 KCNA4P22459 653 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 CD70P32970 193 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 AVPR1AP37288 418 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 LMAN2Q12907 356 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 KCTD21Q4G0X4 260 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 RARS2Q5T160 578 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 GPR158Q5T848 1215 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 C16orf87Q6PH81 154 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 IYDQ6PHW0 289 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 NCEH1Q6PIU2 408 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 TPGS1Q6ZTW0 290 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 CENPLQ8N0S6 344 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 ELMOD1Q8N336 334 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 MDGA1Q8NFP4 955 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SH3RF2Q8TEC5 729 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 LMLNQ96KR4 655 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.98□□□□□ -0.332e-16■■■■■ 26.8
CPNE1-201ENST00000317677 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
CPNE1-201ENST00000317677 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 HCFC2Q9Y5Z7 792 aa12.98□□□□□ -0.33
CPNE1-201ENST00000317677 SLC7A4O43246 635 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 SMAD6O43541 496 aaKnown RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 KDM1AO60341 852 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 KLHL2O95198 593 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 BMP10O95393 424 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 POLR2EP19388 210 aaKnown RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 SAT1P21673 171 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 IGFBP4P22692 258 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 TAS2R39P59534 338 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 CDH18Q13634 790 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 ATXN7L2Q5T6C5 722 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 PTAR1Q7Z6K3 402 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 TRIML2Q8N7C3 387 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 DCAF4L2Q8NA75 395 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 COPG2Q9UBF2 871 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-201ENST00000317677 RAI2Q9Y5P3 530 aa12.97□□□□□ -0.33
CPNE1-201ENST00000317677 A0A0U1RQS6 177 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 TRIM64BA6NI03 449 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 TRIM64CA6NLI5 447 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PRR5-ARHGAP8B1AHC4 643 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 G3V2L1 256 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 K7EPI3 171 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PFDN6O15212 129 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PRAMEF12O95522 483 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 RHOP08100 348 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PRSS56P0CW18 603 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 LEPRP48357 1165 aaKnown RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 ZNF140P52738 457 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 ARHGAP8P85298 464 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 MOGQ16653 247 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PHKG1Q16816 387 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 UGP2Q16851 508 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 TMEM214Q6NUQ4 689 aaKnown RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 ZFP1Q6P2D0 407 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 GPR180Q86V85 440 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 CILP2Q8IUL8 1156 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PCYOX1LQ8NBM8 494 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 HM13Q8TCT9 377 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 BRSK1Q8TDC3 778 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 USP13Q92995 863 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 GPR78Q96P69 363 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 OMDQ99983 421 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 OSBPL10Q9BXB5 764 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PAIP1Q9H074 479 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms