RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HDAC10Q969S8 669 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 ROPN1LQ96C74 230 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 NOL6Q9H6R4 1146 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 TTC24A2A3L6 582 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 CFAP99D6REC4 459 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 ACOX3O15254 700 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 NCAM2O15394 837 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 MAFKO60675 156 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 RASAL1O95294 804 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 MT-CYBP00156 380 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 MATN1P21941 496 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 KPNA2P52292 529 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 ATP6V0D1P61421 351 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 ITGADQ13349 1161 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC45A3Q96JT2 553 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 YIPF2Q9BWQ6 316 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 TRIM8Q9BZR9 551 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 NACA2Q9H009 215 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 GID8Q9NWU2 228 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 TRHDEQ9UKU6 1024 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
SCAMP4-201ENST00000316097 C1orf232A0A0U1RR37 186 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 SULT1C4O75897 302 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 ALDOCP09972 364 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 HMGA1P17096 107 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CAPGP40121 348 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CYP2A13Q16696 494 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TECRLQ5HYJ1 363 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 NADSYN1Q6IA69 706 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 DDIASQ8IXT1 998 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 ATPAF2Q8N5M1 289 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 MAGEE2Q8TD90 523 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 DPF3Q92784 378 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CCDC68Q9H2F9 335 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CATSPERBQ9H7T0 1116 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 IGSF5Q9NSI5 407 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 MAP10Q9P2G4 905 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC2A6Q9UGQ3 507 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TCAF1Q9Y4C2 921 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 A0A087X1B8 175 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 A0A0J9YYE9 177 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 C2orf78A6NCI8 922 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TRIM64BA6NI03 449 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 AURKAO14965 403 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 HOXD12P35452 270 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 POLR2IP36954 125 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 PLD1Q13393 1074 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TRIP4Q15650 581 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 VPS26BQ4G0F5 336 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 PCID2Q5JVF3 399 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF470Q6ECI4 717 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CYHR1Q6ZMK1 362 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC15A3Q8IY34 581 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF683Q8IZ20 524 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 ADGRG5Q8IZF4 528 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 RPL10LQ96L21 214 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TEKT5Q96M29 485 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 CYP2S1Q96SQ9 504 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 RNF38Q9H0F5 515 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 SMPD3Q9NY59 655 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 PKD2L2Q9NZM6 624 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 BACE2Q9Y5Z0 518 aa17.06■□□□□ 0.32
SCAMP4-201ENST00000316097 TMEM247A6NEH6 219 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 J3KR12 359 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 ABLIM3O94929 683 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 ESRRBO95718 433 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 BCL10O95999 233 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 ZDHHC11BP0C7U3 371 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 EEF1B2P24534 225 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 ARNTP27540 789 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 HOXC13P31276 330 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 SOX11P35716 441 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CD151P48509 253 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CYBRD1Q53TN4 286 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 RBM20Q5T481 1227 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 LARP4Q71RC2 724 aaKnown RBP eCLIP17.05■□□□□ 0.327e-7■■□□□ 11.7
SCAMP4-201ENST00000316097 SPRED1Q7Z699 444 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CNTN4Q8IWV2 1026 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 RTL3Q8N8U3 475 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 WBP2Q969T9 261 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 FEM1CQ96JP0 617 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 MYRFLQ96LU7 910 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 C3orf30Q96M34 536 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 RPRD1AQ96P16 312 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 KLHL5Q96PQ7 755 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 PALMDQ9NP74 551 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 TMEM9Q9P0T7 183 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 IFT80Q9P2H3 777 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 ERGIC3Q9Y282 383 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 UBFD1O14562 309 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CHRM3P20309 590 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 GPX3P22352 226 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms