RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CLDN5O00501 218 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 PKMP14618 531 aaKnown RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 BUD31P41223 144 aaPredicted RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 RHAGQ02094 409 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 LCN1P1Q5VSP4 162 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 ANO7Q6IWH7 933 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 FBXL19Q6PCT2 694 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 PDSS2Q86YH6 399 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 TP53INP1Q96A56 240 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 POLR1DQ9Y2S0 133 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 NDST3O95803 873 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 ADAM17P78536 824 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 MRPL45Q9BRJ2 306 aaKnown RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 NUSAP1Q9BXS6 441 aaKnown RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 ATP6V1G1O75348 118 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 IFNGP01579 166 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 PTPN5P54829 565 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 TCEA2Q15560 299 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 GPR156Q8NFN8 814 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
SNED1-201ENST00000310397 NUP214P35658 2090 aaPredicted RBP13.08□□□□□ -0.32
SNED1-201ENST00000310397 KPNA3O00505 521 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 MBTD1Q05BQ5 628 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 CCNIQ14094 377 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 NADK2Q4G0N4 442 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 PIK3R6Q5UE93 754 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 POMGNT2Q8NAT1 580 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 CHCHD6Q9BRQ6 235 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SEC14L3Q9UDX4 400 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 FAM86C2PA6NEL3 165 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 STK16O75716 305 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 PIRTP0C851 137 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 HNF4AP41235 474 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 ENDOVQ8N8Q3 282 aaKnown RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 IRGQQ8WZA9 623 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SKA1Q96BD8 255 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 MED28Q9H204 178 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 MKL2Q9ULH7 1088 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 CACNA1CQ13936 2221 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A5P35504 534 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 IL23RQ5VWK5 629 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SIX5Q8N196 739 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 IPCEF1Q8WWN9 437 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SLC28A2O43868 658 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A9O60656 530 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A6P19224 532 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A1P22309 533 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A4P22310 534 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 L1CAMP32004 1257 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 CDH5P33151 784 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A3P35503 534 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 ADAM2Q99965 735 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 NIFKQ9BYG3 293 aaKnown RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A7Q9HAW7 530 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A10Q9HAW8 530 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 UGT1A8Q9HAW9 530 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 IGSF9Q9P2J2 1179 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SLIT2O94813 1529 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 URADA6NGE7 173 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 ORC5O43913 435 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 ARPC4P59998 168 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 ZDHHC6Q9H6R6 413 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 ZNF24P17028 368 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 CRYBB1P53674 252 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 POU5F1Q01860 360 aaKnown RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 ZNF697Q5TEC3 545 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 C17orf50Q8WW18 174 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 KCNN2Q9H2S1 579 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 BPIFA1Q9NP55 256 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 THG1LQ9NWX6 298 aaKnown RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 CFL2Q9Y281 166 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
SNED1-201ENST00000310397 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 ENO2P09104 434 aaPredicted RBP13.07□□□□□ -0.32
SNED1-201ENST00000310397 DNAJB1P25685 340 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms